Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 1.0e-114 416.8 214 100.0
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 1.2e-107 393.3 214 95.3
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.4e-103 379.0 214 91.6
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 2.0e-102 375.9 214 91.1
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.6e-102 375.6 214 91.1
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 3.3e-97 358.6 214 86.9
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 3.3e-97 358.6 214 86.9
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 3.3e-97 358.6 214 86.9
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.3e-96 356.7 205 91.7
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 5.3e-95 351.3 215 86.5
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 5.3e-95 351.3 214 85.0
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 5.3e-95 351.3 214 85.0
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.3e-89 331.6 221 80.5
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.3e-77 293.5 177 83.6
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.2e-76 288.5 201 75.6
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 1.2e-75 287.0 206 73.8
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 1.1e-71 273.9 216 68.1
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 7.7e-70 267.7 225 64.9
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 1.3e-69 266.9 223 64.1
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 2.2e-69 266.2 222 63.5
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 3.8e-69 265.4 222 65.3
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 6.5e-69 264.6 226 64.2
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 1.9e-68 263.1 215 66.5
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.9e-68 263.1 206 67.5
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 5.5e-68 261.5 225 62.2
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 7.2e-68 261.2 224 64.7
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 2.1e-67 259.6 217 63.1
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 2.7e-67 259.2 220 61.4
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 6.1e-67 258.1 235 62.1
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 6.1e-67 258.1 177 75.1
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 1.4e-66 256.9 231 60.6
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.0e-66 255.4 220 63.2
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 4.0e-66 255.4 198 65.7
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 4.0e-66 255.4 189 68.8
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 5.2e-66 255.0 227 62.1
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 2.6e-65 252.7 177 71.2
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 3.3e-65 252.3 177 70.1
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 4.4e-65 251.9 228 62.3
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.4e-65 251.9 219 63.0
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 5.7e-65 251.5 220 60.5
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 5.7e-65 251.5 212 64.2
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.5e-65 251.1 219 62.6
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 7.5e-65 251.1 205 66.8
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 9.7e-65 250.8 208 65.9
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 9.7e-65 250.8 219 62.1
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.3e-64 250.4 177 69.5
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 1.7e-64 250.0 177 71.8
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.7e-64 250.0 219 62.1
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 2.2e-64 249.6 219 66.2
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.8e-64 249.2 177 68.9
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 8.2e-64 247.7 212 61.8
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 8.2e-64 247.7 216 61.6
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 8.2e-64 247.7 205 62.4
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 1.1e-63 247.3 177 69.5
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 1.1e-63 247.3 227 61.7
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.1e-63 247.3 176 69.3
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.4e-63 246.9 219 61.2
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 2.4e-63 246.1 176 67.6
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 2.4e-63 246.1 177 68.9
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 3.1e-63 245.7 212 62.3
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.1e-63 245.4 219 62.1
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 4.1e-63 245.4 171 72.5
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 7.0e-63 244.6 227 59.9
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 7.0e-63 244.6 225 60.9
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 9.1e-63 244.2 176 67.0
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 9.1e-63 244.2 212 62.3
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 1.6e-62 243.4 199 62.8
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.6e-62 243.4 219 64.8
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 1.6e-62 243.4 227 58.1
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.6e-62 243.4 225 59.6
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 2.7e-62 242.7 222 60.4
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.7e-62 242.7 207 62.3
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 4.5e-62 241.9 235 56.6
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 4.5e-62 241.9 229 58.1
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 5.9e-62 241.5 217 59.0
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 5.9e-62 241.5 222 59.5
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 7.7e-62 241.1 222 59.5
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 1.7e-61 240.0 217 59.9
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.8e-61 238.8 221 58.8
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 5.0e-61 238.4 205 62.4
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.9e-60 236.5 207 60.4
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 3.2e-60 235.7 209 66.0
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 3.2e-60 235.7 210 62.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.1e-59 233.0 194 61.3
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 4.7e-59 231.9 207 58.9
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 4.7e-59 231.9 211 58.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 4.7e-59 231.9 209 59.3
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 8.0e-59 231.1 205 58.5
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 1.4e-58 230.3 220 56.4
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 3.0e-58 229.2 177 62.1
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.2e-57 227.3 200 60.5
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 9.8e-57 224.2 219 58.0
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.7e-56 223.4 171 62.6
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 8.3e-56 221.1 227 56.4
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.8e-55 219.9 176 59.1
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 1.8e-55 219.9 206 57.3
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 4.1e-55 218.8 164 65.2
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 4.1e-55 218.8 164 65.2
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 5.4e-55 218.4 182 64.3
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.9e-54 214.9 205 56.6
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.0e-53 214.2 213 54.0
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.0e-53 214.2 182 63.2
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.2e-53 213.0 194 58.8
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.8e-53 212.2 211 55.0
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 3.8e-53 212.2 217 51.2
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 3.8e-53 212.2 211 55.9
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 3.8e-53 212.2 211 55.9
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 3.8e-53 212.2 155 64.5
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 6.5e-53 211.5 182 63.2
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.9e-52 209.9 212 55.7
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 2.5e-52 209.5 147 69.4
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 3.2e-52 209.1 195 56.4
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 5.5e-52 208.4 155 63.9
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 2.1e-51 206.5 155 63.9
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 3.6e-51 205.7 169 63.3
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 3.6e-51 205.7 176 55.7
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.8e-50 203.4 156 62.2
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 2.3e-50 203.0 155 65.2
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 1.2e-49 200.7 182 57.1
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 1.2e-49 200.7 157 62.4
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 2.0e-49 199.9 166 61.4
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 2.6e-49 199.5 168 57.7
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 4.4e-49 198.7 156 63.5
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 5.7e-49 198.4 155 63.2
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 2.8e-48 196.1 145 63.4
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 8.3e-48 194.5 168 57.1
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.4e-47 193.7 171 57.3
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.4e-47 193.0 128 73.4
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 4.1e-47 192.2 142 66.2
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.2e-46 190.7 153 60.8
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 2.0e-46 189.9 137 66.4
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 1.7e-45 186.8 136 66.9
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.7e-43 178.7 144 64.6
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-41 172.9 118 71.2
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 4.1e-39 165.6 182 46.2
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 2.7e-38 162.9 163 54.6
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 2.7e-38 162.9 163 54.6
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 5.9e-38 161.8 94 87.2
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.0e-37 158.7 106 71.7
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 1.1e-36 157.5 137 55.5
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.5e-36 157.1 106 70.8
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 1.5e-36 157.1 166 45.8
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 4.3e-36 155.6 198 43.4
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 2.8e-35 152.9 179 45.3
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 4.9e-32 142.1 108 64.8
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 4.6e-30 135.6 155 40.6
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 2.1e-19 100.1 157 40.1
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.4e-15 86.7 192 30.7
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 4.2e-07 59.3 59 52.5
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.7e-06 56.6 71 45.1


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