Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1310 Capsella rubella HOM05D003466 ORTHO05D004102 3.3e-107 392.1 265 100.0
CARHR195220 Cardamine hirsuta HOM05D003466 ORTHO05D004102 4.0e-60 235.7 288 65.3
THA.LOC104802883 Tarenaya hassleriana HOM05D003466 ORTHO05D004102 2.2e-58 229.9 288 63.5
THA.LOC104820792 Tarenaya hassleriana HOM05D003466 ORTHO05D004102 2.2e-58 229.9 287 63.8
CARHR265890 Cardamine hirsuta HOM05D003466 ORTHO05D004102 1.3e-55 220.7 260 60.0
Aa31LG11G11660 Aethionema arabicum HOM05D003466 ORTHO05D004102 4.0e-52 209.1 288 62.2
Hma1.2p1_0106F.1_g051170 Hydrangea macrophylla HOM05D003466 ORTHO05D004102 5.3e-52 208.8 284 59.5
Peaxi162Scf00071g00424 Petunia axillaris HOM05D003466 ORTHO05D004102 2.6e-51 206.5 283 59.4
AT5G17900 Arabidopsis thaliana HOM05D003466 ORTHO05D004102 5.8e-51 205.3 288 61.1
AT4G08580 Arabidopsis thaliana HOM05D003466 ORTHO05D004102 1.3e-50 204.1 288 60.8
Atru.chr7.542 Acer truncatum HOM05D003466 ORTHO05D004102 2.2e-50 203.4 286 59.1
Carub.0006s1611 Capsella rubella HOM05D003466 ORTHO05D004102 2.9e-50 203.0 284 61.3
Thhalv10013587m.g Eutrema salsugineum HOM05D003466 ORTHO05D004102 2.9e-50 203.0 288 59.7
BcaB01g04922 Brassica carinata HOM05D003466 ORTHO05D004102 6.4e-50 201.8 282 62.1
BcaC04g18745 Brassica carinata HOM05D003466 ORTHO05D004102 6.4e-50 201.8 283 59.4
MD01G1001200 Malus domestica HOM05D003466 ORTHO05D004102 2.4e-49 199.9 277 59.9
FAN13G2307 Fragaria x ananassa HOM05D003466 ORTHO05D004102 7.1e-49 198.4 285 57.2
C09p59160 Brassica napus HOM05D003466 ORTHO05D004102 1.6e-48 197.2 283 58.7
BolC9t58759H Brassica oleracea HOM05D003466 ORTHO05D004102 1.6e-48 197.2 283 58.7
FvH4_5g26300 Fragaria vesca HOM05D003466 ORTHO05D004102 1.6e-48 197.2 285 59.6
BraA03t10180Z Brassica rapa HOM05D003466 ORTHO05D004102 3.5e-48 196.1 283 59.4
RcHm_v2.0_Chr7g0222731 Rosa chinensis HOM05D003466 ORTHO05D004102 4.6e-48 195.7 286 59.8
FAN18G1357 Fragaria x ananassa HOM05D003466 ORTHO05D004102 7.8e-48 194.9 285 59.6
RcHm_v2.0_Chr2g0119581 Rosa chinensis HOM05D003466 ORTHO05D004102 7.8e-48 194.9 285 59.6
ClCG04G004740 Citrullus lanatus HOM05D003466 ORTHO05D004102 1.0e-47 194.5 286 53.5
AL6G29010 Arabidopsis lyrata HOM05D003466 ORTHO05D004102 2.3e-47 193.4 288 59.7
MELO3C008863.2 Cucumis melo HOM05D003466 ORTHO05D004102 2.3e-47 193.4 286 54.2
BcaB08g36728 Brassica carinata HOM05D003466 ORTHO05D004102 3.9e-47 192.6 285 60.0
Sed0007742 Sechium edule HOM05D003466 ORTHO05D004102 8.7e-47 191.4 283 54.4
A03p08540 Brassica napus HOM05D003466 ORTHO05D004102 1.1e-46 191.0 282 59.2
Sed0012489 Sechium edule HOM05D003466 ORTHO05D004102 1.1e-46 191.0 286 55.6
Sp6g26370 Schrenkiella parvula HOM05D003466 ORTHO05D004102 1.9e-46 190.3 288 61.8
CsaV3_4G031590 Cucumis sativus L. HOM05D003466 ORTHO05D004102 5.6e-46 188.7 286 55.6
BraA10t44221Z Brassica rapa HOM05D003466 ORTHO05D004102 7.3e-46 188.3 282 59.6
DCAR_004345 Daucus carota HOM05D003466 ORTHO05D004102 1.6e-45 187.2 284 56.3
A10p21590 Brassica napus HOM05D003466 ORTHO05D004102 4.8e-45 185.7 283 56.9
FAN15G3298 Fragaria x ananassa HOM05D003466 ORTHO05D004102 1.8e-44 183.7 280 49.6
MBI14_g30653_MAGBIO Magnolia biondii HOM05D003466 ORTHO05D004102 1.2e-43 181.0 284 57.7
C03p09970 Brassica napus HOM05D003466 ORTHO05D004102 2.6e-43 179.9 283 58.3
Eucgr.E01598 Eucalyptus grandis HOM05D003466 ORTHO05D004102 2.6e-43 179.9 286 55.6
Gohir.A11G229400 Gossypium hirsutum HOM05D003466 ORTHO05D004102 4.5e-43 179.1 286 57.0
Gohir.D11G241400 Gossypium hirsutum HOM05D003466 ORTHO05D004102 4.5e-43 179.1 286 57.0
Gorai.007G255500 Gossypium raimondii HOM05D003466 ORTHO05D004102 4.5e-43 179.1 286 57.0
Haze_22082 Corylus avellana HOM05D003466 ORTHO05D004102 5.8e-43 178.7 257 55.3
CiPaw.15G127600 Carya illinoinensis HOM05D003466 ORTHO05D004102 1.7e-42 177.2 257 56.0
TPR.G11896 Trifolium pratense HOM05D003466 ORTHO05D004102 2.2e-42 176.8 254 53.1
Haze_21188 Corylus avellana HOM05D003466 ORTHO05D004102 2.9e-42 176.4 257 55.3
Psat7g075240 Pisum sativum HOM05D003466 ORTHO05D004102 6.4e-42 175.3 260 53.5
QL06p022006 Quercus lobata HOM05D003466 ORTHO05D004102 6.4e-42 175.3 258 60.5
PGR142G0405 Punica granatum HOM05D003466 ORTHO05D004102 1.1e-41 174.5 256 53.5
DCAR_012262 Daucus carota HOM05D003466 ORTHO05D004102 1.4e-41 174.1 259 57.9
Sp3g32640 Schrenkiella parvula HOM05D003466 ORTHO05D004102 1.4e-41 174.1 285 51.2
Nn1g06321 Nelumbo nucifera HOM05D003466 ORTHO05D004102 1.9e-41 173.7 256 59.4
Dinv13777 Davidia involucrata HOM05D003466 ORTHO05D004102 5.4e-41 172.2 257 58.8
TAR623G0841 Trochodendron aralioides HOM05D003466 ORTHO05D004102 5.4e-41 172.2 257 60.3
Dinv05554 Davidia involucrata HOM05D003466 ORTHO05D004102 9.3e-41 171.4 257 58.8
Dinv25045 Davidia involucrata HOM05D003466 ORTHO05D004102 9.3e-41 171.4 257 59.1
MSTRG.8394 Avicennia marina HOM05D003466 ORTHO05D004102 1.2e-40 171.0 286 54.2
Rhsim09G0189500 Rhododendron simsii HOM05D003466 ORTHO05D004102 2.7e-40 169.9 261 57.9
Actinidia38929 Actinidia chinensis HOM05D003466 ORTHO05D004102 3.5e-40 169.5 259 57.5
TWI34G0391 Tripterygium wilfordii HOM05D003466 ORTHO05D004102 3.5e-40 169.5 282 52.8
Lsat_1_v5_gn_1_55421 Lactuca sativa HOM05D003466 ORTHO05D004102 4.6e-40 169.1 286 53.5
Lalb_Chr12g0205661 Lupinus albus HOM05D003466 ORTHO05D004102 4.6e-40 169.1 285 48.1
MD15G1341800 Malus domestica HOM05D003466 ORTHO05D004102 4.6e-40 169.1 253 59.3
vmacro10385 Vaccinium macrocarpon HOM05D003466 ORTHO05D004102 4.6e-40 169.1 259 57.5
VMungo0251G3008 Vigna mungo HOM05D003466 ORTHO05D004102 6.0e-40 168.7 260 51.2
Thecc.05G242600 Theobroma cacao HOM05D003466 ORTHO05D004102 2.3e-39 166.8 257 59.1
Duzib106G0204 Durio zibethinus HOM05D003466 ORTHO05D004102 3.9e-39 166.0 256 58.6
Cc00_g13080 Coffea canephora HOM05D003466 ORTHO05D004102 5.1e-39 165.6 259 56.8
ATR0697G059 Amborella trichopoda HOM05D003466 ORTHO05D004102 6.7e-39 165.2 254 58.3
Nn1g00582 Nelumbo nucifera HOM05D003466 ORTHO05D004102 8.7e-39 164.9 257 58.0
Phvul.003G051500 Phaseolus vulgaris HOM05D003466 ORTHO05D004102 1.1e-38 164.5 259 57.1
SalBow7G4471 Salvia bowleyana HOM05D003466 ORTHO05D004102 1.1e-38 164.5 262 56.5
C07p24050 Brassica napus HOM05D003466 ORTHO05D004102 1.5e-38 164.1 286 46.2
BcaB03g14395 Brassica carinata HOM05D003466 ORTHO05D004102 1.9e-38 163.7 286 45.8
BolC7t42929H Brassica oleracea HOM05D003466 ORTHO05D004102 1.9e-38 163.7 286 45.8
CSS0032791 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 2.5e-38 163.3 245 56.3
CSS0047344 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 2.5e-38 163.3 245 56.3
Os02g0280100 Oryza sativa ssp. japonica HOM05D003466 ORTHO05D004102 2.5e-38 163.3 275 53.8
MSTRG.150 Avicennia marina HOM05D003466 ORTHO05D004102 3.3e-38 162.9 258 56.2
Duzib128G1823 Durio zibethinus HOM05D003466 ORTHO05D004102 3.3e-38 162.9 258 58.1
Prupe.4G226700 Prunus persica HOM05D003466 ORTHO05D004102 4.3e-38 162.5 258 58.9
CSS0012966 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 5.6e-38 162.2 257 53.7
CSS0029529 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 5.6e-38 162.2 257 53.7
Lj1C1073T4 Lonicera japonica HOM05D003466 ORTHO05D004102 5.6e-38 162.2 284 53.9
unitig_8.g3898 Utricularia gibba HOM05D003466 ORTHO05D004102 7.4e-38 161.8 284 53.2
BraA01t03144Z Brassica rapa HOM05D003466 ORTHO05D004102 1.3e-37 161.0 263 51.7
PSO339G1378 Papaver somniferum HOM05D003466 ORTHO05D004102 1.3e-37 161.0 256 55.5
Prupe.6G162200 Prunus persica HOM05D003466 ORTHO05D004102 2.1e-37 160.2 255 58.4
HPP92_009864 Vanilla planifolia HOM05D003466 ORTHO05D004102 3.7e-37 159.5 254 56.7
Medtr8g083140 Medicago truncatula HOM05D003466 ORTHO05D004102 4.8e-37 159.1 258 57.8
Ca_17998_v3 Cicer arietinum L. HOM05D003466 ORTHO05D004102 6.2e-37 158.7 254 52.4
PSO063G0954 Papaver somniferum HOM05D003466 ORTHO05D004102 8.1e-37 158.3 256 55.5
SEGI_04842 Sequoiadendron giganteum HOM05D003466 ORTHO05D004102 8.1e-37 158.3 261 55.9
FAN15G1350 Fragaria x ananassa HOM05D003466 ORTHO05D004102 1.1e-36 157.9 259 59.1
Zm00001eb196610 Zea mays HOM05D003466 ORTHO05D004102 1.1e-36 157.9 283 55.8
Hund15775 Selenicereus undatus HOM05D003466 ORTHO05D004102 1.4e-36 157.5 261 55.2
Glyma.08G108300 Glycine max HOM05D003466 ORTHO05D004102 1.8e-36 157.1 264 50.0
BcaB08g34851 Brassica carinata HOM05D003466 ORTHO05D004102 3.1e-36 156.4 283 52.7
Eucgr.J03113 Eucalyptus grandis HOM05D003466 ORTHO05D004102 3.1e-36 156.4 286 52.8
CANSAT25G0815 Cannabis sativa HOM05D003466 ORTHO05D004102 4.0e-36 156.0 284 52.5
CANSAT80G2535 Cannabis sativa HOM05D003466 ORTHO05D004102 4.0e-36 156.0 284 52.5
Potri.019G039900 Populus trichocarpa HOM05D003466 ORTHO05D004102 4.0e-36 156.0 260 55.0
SGA_v2.0_scaffold44G16596 Striga asiatica HOM05D003466 ORTHO05D004102 4.0e-36 156.0 264 54.5
Glyma.05G151500 Glycine max HOM05D003466 ORTHO05D004102 5.3e-36 155.6 260 50.0
Sabra19G0050200 Salix brachista HOM05D003466 ORTHO05D004102 6.9e-36 155.2 289 50.9
AUR62032478 Chenopodium quinoa HOM05D003466 ORTHO05D004102 1.5e-35 154.1 260 54.6
EL10Ac2g02698 Beta vulgaris HOM05D003466 ORTHO05D004102 2.6e-35 153.3 256 59.8
Lj4g0028177 Lotus japonicus HOM05D003466 ORTHO05D004102 2.6e-35 153.3 282 53.5
Migut.F01214 Erythranthe guttata HOM05D003466 ORTHO05D004102 3.4e-35 152.9 260 53.1
SMO364G0903 Selaginella moellendorffii HOM05D003466 ORTHO05D004102 3.4e-35 152.9 297 51.5
ECA248G3292 Erigeron canadensis HOM05D003466 ORTHO05D004102 5.8e-35 152.1 293 51.2
Sc10g0003130 Simmondsia chinensis HOM05D003466 ORTHO05D004102 1.0e-34 151.4 246 57.7
unitig_22.g5474 Utricularia gibba HOM05D003466 ORTHO05D004102 1.3e-34 151.0 284 51.1
Aqoxy1G00514 Aquilegia oxysepala HOM05D003466 ORTHO05D004102 2.2e-34 150.2 286 49.0
BcaB01g05163 Brassica carinata HOM05D003466 ORTHO05D004102 2.2e-34 150.2 283 57.6
BolC3t13485H Brassica oleracea HOM05D003466 ORTHO05D004102 2.2e-34 150.2 283 57.6
LjContig00357g0023779 Lotus japonicus HOM05D003466 ORTHO05D004102 1.4e-33 147.5 291 45.4
Nitab4.5_0005883g0020 Nicotiana tabacum HOM05D003466 ORTHO05D004102 3.2e-33 146.4 273 48.0
Pp3c6_19380 Physcomitrium patens HOM05D003466 ORTHO05D004102 3.2e-33 146.4 261 55.2
Ciclev10020229m.g Citrus clementina HOM05D003466 ORTHO05D004102 5.5e-33 145.6 255 55.3
Lj1C1073T5 Lonicera japonica HOM05D003466 ORTHO05D004102 1.2e-32 144.4 258 53.1
AagrBONN_evm.TU.Sc2ySwM_362.1620 Anthoceros agrestis HOM05D003466 ORTHO05D004102 2.7e-32 143.3 259 54.4
Mapoly0065s0046 Marchantia polymorpha HOM05D003466 ORTHO05D004102 1.3e-31 141.0 259 52.5
QL04p079149 Quercus lobata HOM05D003466 ORTHO05D004102 1.3e-31 141.0 257 52.5
Cpa.g.sc2.346 Carica papaya HOM05D003466 ORTHO05D004102 1.8e-31 140.6 285 51.2
Peaxi162Scf00673g00432 Petunia axillaris HOM05D003466 ORTHO05D004102 1.8e-31 140.6 284 51.4
AUR62042249 Chenopodium quinoa HOM05D003466 ORTHO05D004102 3.9e-31 139.4 263 37.6
HanXRQChr01g0026931 Helianthus annuus HOM05D003466 ORTHO05D004102 5.1e-31 139.0 259 51.4
Potri.013G065600 Populus trichocarpa HOM05D003466 ORTHO05D004102 2.5e-30 136.7 260 52.3
CBR_g12232 Chara braunii HOM05D003466 ORTHO05D004102 2.1e-29 133.7 281 48.8
FAN27G0165 Fragaria x ananassa HOM05D003466 ORTHO05D004102 8.2e-29 131.7 214 56.1
BraA07t29363Z Brassica rapa HOM05D003466 ORTHO05D004102 5.3e-28 129.0 284 46.1
Oeu046439.1 Olea europaea HOM05D003466 ORTHO05D004102 6.9e-28 128.6 272 37.9
A07p16360 Brassica napus HOM05D003466 ORTHO05D004102 1.5e-27 127.5 284 48.2
Sabra15G0065800 Salix brachista HOM05D003466 ORTHO05D004102 2.6e-27 126.7 248 45.6
AL8G27400 Arabidopsis lyrata HOM05D003466 ORTHO05D004102 5.8e-27 125.6 76 82.9
Manes.09G136800 Manihot esculenta HOM05D003466 ORTHO05D004102 1.3e-26 124.4 257 49.8
Solyc01g100500.3 Solanum lycopersicum HOM05D003466 ORTHO05D004102 1.3e-26 124.4 257 46.7
Sopen01g044010 Solanum pennellii HOM05D003466 ORTHO05D004102 2.9e-26 123.2 257 47.5
Lalb_Chr07g0186841 Lupinus albus HOM05D003466 ORTHO05D004102 2.5e-25 120.2 285 41.4
Nitab4.5_0000368g0060 Nicotiana tabacum HOM05D003466 ORTHO05D004102 2.5e-25 120.2 256 46.1
PGSC0003DMG400002770 Solanum tuberosum HOM05D003466 ORTHO05D004102 1.2e-24 117.9 255 45.5
CAN.G1076.6 Capsicum annuum HOM05D003466 ORTHO05D004102 2.7e-24 116.7 267 48.7
Cfa017016 Carpinus fangiana HOM05D003466 ORTHO05D004102 3.5e-24 116.3 109 58.7
GSVIVG01029154001 Vitis vinifera HOM05D003466 ORTHO05D004102 3.5e-24 116.3 249 38.6
Ah.12g064760 Amaranthus hybridus HOM05D003466 ORTHO05D004102 1.3e-23 114.4 260 54.6
Ah.12g064750 Amaranthus hybridus HOM05D003466 ORTHO05D004102 1.8e-23 114.0 261 54.4
CDE06G0675 Ceratophyllum demersum HOM05D003466 ORTHO05D004102 1.8e-23 114.0 109 58.7
Eucgr.L03273 Eucalyptus grandis HOM05D003466 ORTHO05D004102 2.3e-23 113.6 205 57.1
arahy.Tifrunner.gnm1.ann1.WPUK1Z Arachis hypogaea HOM05D003466 ORTHO05D004102 3.0e-23 113.2 111 57.7
FAN01G2678 Fragaria x ananassa HOM05D003466 ORTHO05D004102 6.7e-23 112.1 105 62.9
CDE06G0321 Ceratophyllum demersum HOM05D003466 ORTHO05D004102 1.1e-22 111.3 107 58.9
Oeu012666.1 Olea europaea HOM05D003466 ORTHO05D004102 2.5e-22 110.2 250 42.8
Thhalv10023093m.g Eutrema salsugineum HOM05D003466 ORTHO05D004102 3.7e-21 106.3 103 59.2
arahy.Tifrunner.gnm1.ann1.GMJ520 Arachis hypogaea HOM05D003466 ORTHO05D004102 8.2e-21 105.1 261 44.1
COL.COLO4_23028 Corchorus olitorius HOM05D003466 ORTHO05D004102 8.2e-21 105.1 241 49.4
Thhalv10009152m.g Eutrema salsugineum HOM05D003466 ORTHO05D004102 1.1e-20 104.8 90 65.6
Thhalv10023970m.g Eutrema salsugineum HOM05D003466 ORTHO05D004102 2.4e-20 103.6 87 67.8
Nitab4.5_0000841g0090 Nicotiana tabacum HOM05D003466 ORTHO05D004102 5.9e-19 99.0 256 46.5
COL.COLO4_29543 Corchorus olitorius HOM05D003466 ORTHO05D004102 1.4e-17 94.4 245 47.3
vmacro09137 Vaccinium macrocarpon HOM05D003466 ORTHO05D004102 2.1e-16 90.5 236 42.8
COL.COLO4_23021 Corchorus olitorius HOM05D003466 ORTHO05D000454 2.7e-16 90.1 261 46.0
SEGI_19842 Sequoiadendron giganteum HOM05D003466 ORTHO05D004102 7.4e-14 82.0 221 47.1
SEGI_30994 Sequoiadendron giganteum HOM05D003466 ORTHO05D004102 7.4e-14 82.0 221 47.1
Os06g0335101 Oryza sativa ssp. japonica HOM05D003466 ORTHO05D004102 9.7e-14 81.6 107 46.7
Lj1g0005079 Lotus japonicus HOM05D003466 ORTHO05D004102 4.8e-13 79.3 233 36.9
COL.COLO4_17204 Corchorus olitorius HOM05D003466 ORTHO05D004102 1.8e-12 77.4 111 49.5
COL.COLO4_17202 Corchorus olitorius HOM05D003466 ORTHO05D004102 1.2e-11 74.7 83 50.6
Cre05.g232950 Chlamydomonas reinhardtii HOM05D003466 ORTHO05D004102 2.0e-11 73.9 93 44.1
Rhsim07G0176000 Rhododendron simsii HOM05D003466 ORTHO05D004102 2.6e-11 73.6 195 31.3
vmacro20986 Vaccinium macrocarpon HOM05D003466 ORTHO05D004102 1.3e-10 71.2 93 48.4
QL04p079025 Quercus lobata HOM05D003466 ORTHO05D004102 1.9e-09 67.4 70 57.1
TPR.G4989 Trifolium pratense HOM05D003466 ORTHO05D004102 2.7e-08 63.5 72 51.4
vmacro20985 Vaccinium macrocarpon HOM05D003466 ORTHO05D004102 2.3e-07 60.5 252 29.0
Os02g0294000 Oryza sativa ssp. japonica HOM05D003466 ORTHO05D004102 7.4e-06 55.5 108 37.0


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