Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1287 Capsella rubella HOM05D009421 ORTHO05D012578 5.5e-76 287.7 163 100.0
AT5G52730 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 2.9e-16 89.4 97 49.5
Thhalv10015441m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 4.3e-12 75.5 74 47.3
CARHR265660 Cardamine hirsuta HOM05D009421 ORTHO05D012578 1.6e-11 73.6 74 48.6
BraA03t10850Z Brassica rapa HOM05D009421 ORTHO05D012578 1.1e-10 70.9 73 47.9
Thhalv10015036m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 1.4e-10 70.5 77 46.8
AT5G52670 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 1.8e-10 70.1 81 45.7
BcaB01g04209 Brassica carinata HOM05D009421 ORTHO05D012578 2.3e-10 69.7 79 44.3
AL8G27140 Arabidopsis lyrata HOM05D009421 ORTHO05D012578 5.2e-10 68.6 81 44.4
Sp6g14850 Schrenkiella parvula HOM05D009421 ORTHO05D012578 1.5e-09 67.0 79 43.0
AT5G52720 Arabidopsis thaliana HOM05D009421 ORTHO05D012578 4.4e-09 65.5 82 42.7
Sp6g14840 Schrenkiella parvula HOM05D009421 ORTHO05D012578 9.8e-09 64.3 79 41.8
Thhalv10015970m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 4.1e-07 58.9 75 38.7
Thhalv10016007m.g Eutrema salsugineum HOM05D009421 ORTHO05D012578 4.1e-07 58.9 62 45.2
Carub.0008s1281 Capsella rubella HOM05D009421 ORTHO05D012578 7.1e-07 58.2 54 51.9
AT5G52680 Arabidopsis thaliana HOM05D009421 ORTHO05D023636 7.8e-06 54.7 80 40.0


User provided reference genes

Program Settings