Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 5.7e-65 250.8 125 100.0
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 7.0e-55 217.2 116 91.4
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 2.0e-54 215.7 116 91.4
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.1e-52 209.9 116 88.8
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 3.0e-50 201.8 118 83.9
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.5e-49 199.5 126 81.7
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 3.3e-49 198.4 121 83.5
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 5.7e-49 197.6 126 81.0
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 1.7e-48 196.1 116 84.5
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 2.2e-48 195.7 117 81.2
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 4.8e-48 194.5 126 79.4
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.4e-47 193.0 118 81.4
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 3.1e-47 191.8 126 77.8
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 8.0e-43 177.2 117 75.2
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.1e-36 156.8 120 65.0
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.5e-36 156.4 121 64.5
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.5e-36 156.4 119 66.4
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.9e-36 156.0 118 69.5
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.3e-36 155.2 121 62.8
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 4.2e-36 154.8 120 65.8
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 9.5e-36 153.7 120 64.2
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 63.9
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 66.4
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.6e-35 152.9 122 65.6
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 68.9
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 65.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 2.1e-35 152.5 120 64.2
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.1e-35 152.5 129 64.3
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.8e-35 152.1 121 66.9
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 2.8e-35 152.1 119 66.4
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 3.6e-35 151.8 119 65.5
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.7e-35 151.4 121 66.1
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 4.7e-35 151.4 128 61.7
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 4.7e-35 151.4 119 68.1
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.1e-35 151.0 120 61.7
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 6.1e-35 151.0 119 66.4
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 6.1e-35 151.0 121 66.1
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 6.1e-35 151.0 119 63.0
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 8.0e-35 150.6 119 66.4
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 8.0e-35 150.6 119 63.0
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.0e-34 150.2 119 64.7
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.4e-34 149.8 121 62.8
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.4e-34 149.8 117 65.0
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.4e-34 149.8 117 65.0
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.3e-34 149.1 117 68.4
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.3e-34 149.1 121 66.1
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.0e-34 148.7 119 65.5
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 3.0e-34 148.7 121 64.5
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.0e-34 148.7 114 67.5
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 4.0e-34 148.3 114 65.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 4.0e-34 148.3 114 66.7
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 5.2e-34 147.9 130 60.8
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 6.8e-34 147.5 117 62.4
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 8.9e-34 147.1 121 61.2
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 8.9e-34 147.1 123 63.4
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 8.9e-34 147.1 125 62.4
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.2e-33 146.7 121 63.6
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.2e-33 146.7 114 64.9
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.2e-33 146.7 122 61.5
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.5e-33 146.4 120 63.3
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.5e-33 146.4 125 63.2
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 3.4e-33 145.2 121 62.0
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 4.4e-33 144.8 126 59.5
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 5.7e-33 144.4 122 62.3
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 5.7e-33 144.4 119 63.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 7.5e-33 144.1 121 65.3
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.3e-32 143.3 124 61.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.3e-32 143.3 129 58.9
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 1.7e-32 142.9 133 56.4
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.7e-32 142.9 123 61.0
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.7e-32 142.9 121 62.0
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 2.2e-32 142.5 114 65.8
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.8e-32 142.1 112 66.1
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 2.8e-32 142.1 119 62.2
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 2.8e-32 142.1 129 58.9
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 3.7e-32 141.7 119 60.5
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 3.7e-32 141.7 121 62.8
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.7e-32 141.7 121 62.8
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 3.7e-32 141.7 125 61.6
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.7e-32 141.7 126 61.9
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 4.9e-32 141.4 123 64.2
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 4.9e-32 141.4 115 61.7
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 6.3e-32 141.0 134 56.7
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.3e-32 141.0 115 65.2
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 6.3e-32 141.0 126 59.5
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 6.3e-32 141.0 127 59.8
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 8.3e-32 140.6 124 62.9
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 8.3e-32 140.6 115 65.2
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.3e-32 140.6 115 65.2
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.1e-31 140.2 119 62.2
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-31 139.8 115 65.2
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.4e-31 139.8 123 61.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.8e-31 139.4 113 63.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.1e-31 138.7 140 53.6
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 3.1e-31 138.7 114 62.3
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 4.1e-31 138.3 130 57.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 9.2e-31 137.1 157 47.8
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 9.2e-31 137.1 119 59.7
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.6e-30 136.3 114 64.0
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.0e-29 133.7 119 58.0
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.5e-28 129.0 114 62.3
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 3.4e-25 118.6 120 51.7
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.8e-25 117.9 119 54.6
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 3.2e-23 112.1 127 52.0
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 7.0e-23 110.9 80 71.2
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.3e-21 106.7 121 48.8
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.6e-19 99.8 129 47.3
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 2.3e-18 95.9 72 61.1
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.2e-17 93.6 120 41.7
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.9e-15 86.3 63 69.8
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 1.0e-13 80.5 121 39.7
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.5e-12 76.6 58 63.8
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.6e-11 73.2 58 55.2
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.8e-11 72.4 78 52.6
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 3.7e-08 62.0 108 35.2


User provided reference genes

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