Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1162 Capsella rubella HOM05D012191 ORTHO05D015943 2.0e-84 316.2 224 100.0
BcaC01g06131 Brassica carinata HOM05D012191 ORTHO05D015943 1.3e-32 144.1 244 49.2
BolC3t14284H Brassica oleracea HOM05D012191 ORTHO05D015943 1.3e-32 144.1 244 49.2
C03p18930 Brassica napus HOM05D012191 ORTHO05D015943 4.3e-31 139.0 244 48.4
A03p16080 Brassica napus HOM05D012191 ORTHO05D015943 1.3e-24 117.5 220 46.8
BraA03t10899Z Brassica rapa HOM05D012191 ORTHO05D015943 1.3e-24 117.5 220 46.8
Sp6g13820 Schrenkiella parvula HOM05D012191 ORTHO05D015943 7.4e-23 111.7 231 45.0
AT5G51585 Arabidopsis thaliana HOM05D012191 ORTHO05D015943 2.9e-19 99.8 59 84.7
BcaB01g04164 Brassica carinata HOM05D012191 ORTHO05D015943 1.4e-18 97.4 228 51.3
AL130U10020 Arabidopsis lyrata HOM05D012191 ORTHO05D015943 2.5e-18 96.7 267 48.3
CARHR264380 Cardamine hirsuta HOM05D012191 ORTHO05D015943 5.5e-18 95.5 235 51.5
BcaC04g20655 Brassica carinata HOM05D012191 ORTHO05D039764 1.7e-06 57.4 160 35.0
C09p40940 Brassica napus HOM05D012191 ORTHO05D039764 1.7e-06 57.4 160 35.0
BraA03t09668Z Brassica rapa HOM05D001120 ORTHO05D002447 2.8e-06 56.6 59 47.5
A03p03110 Brassica napus HOM05D001120 ORTHO05D002447 8.2e-06 55.1 44 54.5


User provided reference genes

Program Settings