Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1110 Capsella rubella HOM05D008385 ORTHO05D010806 6.9e-102 374.0 193 100.0
Carub.0008s1111 Capsella rubella HOM05D008385 ORTHO05D010806 1.3e-76 290.0 193 80.3
AT1G11362 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.7e-39 166.8 187 52.4
Carub.0001s2729 Capsella rubella HOM05D008385 ORTHO05D010806 4.5e-37 158.7 194 47.4
AT1G50325 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 3.3e-35 152.5 192 46.9
Carub.0001s1097 Capsella rubella HOM05D008385 ORTHO05D010806 1.8e-33 146.7 187 48.1
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 1.6e-26 123.6 192 39.1
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 4.7e-26 122.1 188 40.4
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 8.0e-26 121.3 192 38.5
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 1.0e-25 120.9 192 38.5
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.0e-25 120.9 176 42.6
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 3.1e-25 119.4 187 39.0
Carub.0001s1211 Capsella rubella HOM05D008385 ORTHO05D010806 5.2e-25 118.6 193 37.3
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 1.2e-24 117.5 188 39.4
A08p33500 Brassica napus HOM05D008385 ORTHO05D010806 3.4e-24 115.9 187 39.6
BraA08t35266Z Brassica rapa HOM05D008385 ORTHO05D010806 3.4e-24 115.9 187 39.6
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 7.5e-24 114.8 192 37.5
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 7.5e-24 114.8 181 39.8
Carub.0001s1209 Capsella rubella HOM05D008385 ORTHO05D010806 1.3e-23 114.0 193 36.3
Carub.0007s3098 Capsella rubella HOM05D008385 ORTHO05D010806 2.2e-23 113.2 118 56.8
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 2.2e-23 113.2 187 39.6
Carub.0001s2747 Capsella rubella HOM05D008385 ORTHO05D010806 2.9e-23 112.8 153 45.1
AT3G27999 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 8.3e-23 111.3 193 38.9
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 1.4e-22 110.5 192 37.5
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 4.1e-22 109.0 142 43.7
AT1G11593 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 7.0e-22 108.2 193 37.3
AT4G03945 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.6e-21 107.1 193 38.3
Thhalv10019766m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 7.8e-21 104.8 177 37.9
A08p15720 Brassica napus HOM05D008385 ORTHO05D010806 1.3e-20 104.0 194 35.1
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 2.3e-20 103.2 187 36.9
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 8.6e-20 101.3 185 36.8
C08p14420 Brassica napus HOM05D008385 ORTHO05D010806 2.5e-19 99.8 187 36.4
Thhalv10009973m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 5.6e-19 98.6 186 38.7
BolC8t49085H Brassica oleracea HOM05D008385 ORTHO05D010806 1.2e-18 97.4 177 36.2
BcaC09g50995 Brassica carinata HOM05D008385 ORTHO05D010806 1.6e-18 97.1 161 34.2
AL1G57970 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 4.0e-17 92.4 107 47.7
Carub.0002s0689 Capsella rubella HOM05D008385 ORTHO05D010806 2.6e-16 89.7 157 34.4
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 9.8e-16 87.8 174 33.9
Thhalv10009564m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 2.4e-14 83.2 193 31.1
Thhalv10027044m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 5.4e-14 82.0 186 33.3
AL851U10010 Arabidopsis lyrata HOM05D008385 ORTHO05D009288 7.1e-14 81.6 86 48.8
Thhalv10010004m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 7.1e-14 81.6 99 45.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.6e-13 80.5 180 31.1
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 2.1e-13 80.1 174 33.9
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.7e-13 79.7 172 31.4
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 3.5e-13 79.3 150 34.7
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 4.6e-13 79.0 181 32.6
Aa31LG10G5760 Aethionema arabicum HOM05D008385 ORTHO05D010806 3.9e-12 75.9 178 31.5
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.1e-12 75.5 180 29.4
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.6e-12 74.7 180 29.4
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.3e-11 71.6 176 29.5
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.6e-10 70.5 175 30.9
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.8e-10 69.7 176 29.0
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 6.2e-10 68.6 131 33.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 6.2e-10 68.6 170 29.4
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-09 67.8 176 29.0
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 6.8e-09 65.1 181 28.7
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 6.8e-09 65.1 147 25.9
Aa31LG10G5780 Aethionema arabicum HOM05D000036 ORTHO05D001038 8.9e-09 64.7 132 31.8
A08p05340 Brassica napus HOM05D003146 ORTHO05D001819 1.2e-08 64.3 180 28.3
BraSC267t45946Z Brassica rapa HOM05D003146 ORTHO05D001819 1.2e-08 64.3 180 28.3
BcaC07g37182 Brassica carinata HOM05D003146 ORTHO05D001819 2.6e-08 63.2 180 27.8
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 3.4e-08 62.8 181 28.2
C08p05630 Brassica napus HOM05D003146 ORTHO05D001819 4.4e-08 62.4 180 27.2
BolC8t47376H Brassica oleracea HOM05D003146 ORTHO05D001819 4.4e-08 62.4 180 27.2
BcaB04g17471 Brassica carinata HOM05D003146 ORTHO05D001819 5.8e-08 62.0 180 26.7
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 7.6e-08 61.6 164 26.2
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 9.9e-08 61.2 154 31.2
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 9.9e-08 61.2 178 26.4
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 9.9e-08 61.2 180 26.7
THA.LOC104802647 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.7e-07 60.5 181 28.2
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 3.7e-07 59.3 180 26.7
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 1.1e-06 57.8 183 27.9
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.1e-06 57.8 181 26.5
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 5.4e-06 55.5 180 26.7


User provided reference genes

Program Settings