Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1056 Capsella rubella HOM05D011936 ORTHO05D014852 8.5e-35 149.8 78 100.0
AT5G50443 Arabidopsis thaliana HOM05D011936 ORTHO05D014852 2.4e-29 131.7 84 86.9
AL8G24690 Arabidopsis lyrata HOM05D011936 ORTHO05D014852 9.1e-29 129.8 84 85.7
C02p20830 Brassica napus HOM05D011936 ORTHO05D014852 6.1e-25 117.1 78 80.8
BolC2t08223H Brassica oleracea HOM05D011936 ORTHO05D014852 6.1e-25 117.1 78 80.8
A02p12770 Brassica napus HOM05D011936 ORTHO05D014852 8.0e-25 116.7 78 80.8
BraA02t06334Z Brassica rapa HOM05D011936 ORTHO05D014852 8.0e-25 116.7 78 80.8
Sp6g12625 Schrenkiella parvula HOM05D011936 ORTHO05D014852 4.9e-22 107.5 79 75.9
SpUn0015_0010 Schrenkiella parvula HOM05D011936 ORTHO05D014852 4.9e-22 107.5 79 75.9
CARHR257850 Cardamine hirsuta HOM05D011936 ORTHO05D014852 1.6e-20 102.4 80 73.8
Thhalv10015176m.g Eutrema salsugineum HOM05D011936 ORTHO05D014852 2.9e-19 98.2 81 72.8
BcaC03g14648 Brassica carinata HOM05D011936 ORTHO05D014852 1.1e-18 96.3 63 81.0
BcaB05g24047 Brassica carinata HOM05D011936 ORTHO05D014852 3.6e-17 91.3 63 77.8
BcaB05g24747 Brassica carinata HOM05D008786 ORTHO05D011065 7.0e-13 77.0 97 54.6
A10p08280 Brassica napus HOM05D011936 ORTHO05D041677 5.6e-10 67.4 54 70.4
BraSC35t45972Z Brassica rapa HOM05D011936 ORTHO05D041677 5.6e-10 67.4 54 70.4
CARHR065230 Cardamine hirsuta HOM05D008786 ORTHO05D011065 5.6e-10 67.4 97 52.6
BcaB03g14979 Brassica carinata HOM05D008786 ORTHO05D011065 2.8e-09 65.1 102 45.1
Thhalv10009909m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 2.8e-09 65.1 94 54.3
CARHR017880 Cardamine hirsuta HOM05D008786 ORTHO05D011065 6.2e-09 63.9 93 51.6
AT1G17285 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 2.3e-08 62.0 100 47.0
BraA07t31409Z Brassica rapa HOM05D008786 ORTHO05D011065 2.3e-08 62.0 100 45.0
Thhalv10019794m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 2.3e-08 62.0 80 53.8
Sp5g27390 Schrenkiella parvula HOM05D008786 ORTHO05D011065 2.3e-08 62.0 102 45.1
A07p38490 Brassica napus HOM05D008786 ORTHO05D011065 5.2e-08 60.8 100 44.0
Aa31LG4G2690 Aethionema arabicum HOM05D008786 ORTHO05D011065 8.9e-08 60.1 100 44.0
AL1G29540 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 1.5e-07 59.3 93 49.5
BcaC03g15370 Brassica carinata HOM05D008786 ORTHO05D011065 4.4e-07 57.8 76 51.3
BraA02t06842Z Brassica rapa HOM05D008786 ORTHO05D011065 4.4e-07 57.8 76 52.6
BcaC08g46687 Brassica carinata HOM05D008786 ORTHO05D011065 5.8e-07 57.4 90 43.3
C02p29830 Brassica napus HOM05D008786 ORTHO05D011065 5.8e-07 57.4 79 50.6
C06p46670 Brassica napus HOM05D008786 ORTHO05D011065 5.8e-07 57.4 90 43.3
BolC6t39712H Brassica oleracea HOM05D008786 ORTHO05D011065 5.8e-07 57.4 90 43.3
Carub.0002s1917 Capsella rubella HOM05D008786 ORTHO05D011065 5.8e-07 57.4 102 45.1
BolC2t09030H Brassica oleracea HOM05D008786 ORTHO05D011065 1.7e-06 55.8 76 51.3
C06p35030 Brassica napus HOM05D008786 ORTHO05D011065 3.7e-06 54.7 102 44.1
BolC6t38602H Brassica oleracea HOM05D008786 ORTHO05D011065 3.7e-06 54.7 102 44.1
A07p30280 Brassica napus HOM05D008786 ORTHO05D042067 6.4e-06 53.9 102 42.2
Carub.0001s1705 Capsella rubella HOM05D008786 ORTHO05D011065 6.4e-06 53.9 77 46.8
BcaB03g15660 Brassica carinata HOM05D008786 ORTHO05D011065 8.3e-06 53.5 102 43.1


User provided reference genes

Program Settings