Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 9.2e-96 353.6 185 100.0
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 7.6e-82 307.4 185 86.5
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 3.6e-47 192.2 187 57.8
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.6e-44 183.3 185 54.1
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 5.3e-43 178.3 185 53.0
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-41 172.9 185 55.1
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 5.1e-38 161.8 144 57.6
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.2e-32 141.4 185 45.9
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-30 137.1 184 46.7
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.4e-30 137.1 182 48.4
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.4e-29 132.1 175 46.3
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 4.5e-26 122.1 185 42.7
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.7e-26 121.3 185 44.3
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.0e-25 120.9 182 44.5
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.3e-25 120.6 181 44.8
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.3e-25 120.6 185 43.8
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.7e-25 120.2 182 44.5
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 5.0e-25 118.6 182 44.5
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-24 117.1 188 42.6
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.5e-24 116.3 145 46.2
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.5e-24 116.3 182 42.9
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.2e-24 115.5 183 41.0
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 9.4e-24 114.4 185 42.2
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 2.7e-23 112.8 185 41.6
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 3.6e-23 112.5 182 41.8
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 3.6e-23 112.5 184 43.5
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.7e-23 112.1 185 37.8
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 4.0e-22 109.0 183 42.6
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 4.0e-22 109.0 182 40.7
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 5.2e-22 108.6 185 42.7
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 5.2e-22 108.6 178 40.4
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 5.2e-22 108.6 183 42.6
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 1.2e-21 107.5 185 42.2
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-21 107.1 185 38.9
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.5e-21 107.1 182 38.5
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 2.0e-21 106.7 183 39.3
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 2.0e-21 106.7 185 42.2
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-21 106.3 185 41.6
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-21 106.3 178 39.9
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 3.3e-21 105.9 178 39.3
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 3.3e-21 105.9 178 39.3
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 3.3e-21 105.9 178 39.9
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 3.3e-21 105.9 178 39.3
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 5.7e-21 105.1 182 40.7
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 9.7e-21 104.4 182 39.6
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 1.3e-20 104.0 183 38.3
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 6.3e-20 101.7 185 39.5
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-19 100.5 182 39.6
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 2.4e-19 99.8 185 40.5
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 7.0e-19 98.2 182 38.5
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.2e-18 97.4 182 37.9
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 1.2e-18 97.4 178 38.8
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.0e-18 96.7 161 40.4
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.7e-18 96.3 182 39.6
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.5e-18 95.5 182 38.5
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.9e-18 95.1 179 40.2
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 7.7e-18 94.7 173 37.0
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-17 94.4 187 41.7
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.5e-16 90.5 188 35.6
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 1.9e-16 90.1 182 36.3
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.4e-16 87.8 161 35.4
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 6.1e-15 85.1 185 35.1
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 6.1e-15 85.1 182 35.2
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 8.0e-15 84.7 185 36.2
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 1.4e-14 84.0 168 38.1
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 8.8e-14 81.3 182 35.2
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 1.5e-13 80.5 182 34.6
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.0e-13 80.1 182 35.2
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 4.4e-13 79.0 182 34.6
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 4.4e-13 79.0 182 34.1
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 5.7e-13 78.6 182 34.6
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 6.3e-12 75.1 182 34.1
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 1.1e-11 74.3 184 32.1
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 7.7e-10 68.2 184 31.0
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.3e-09 67.4 117 37.6
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 5.0e-09 65.5 106 37.7
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 5.0e-09 65.5 190 29.5
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 6.5e-09 65.1 190 29.5
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 1.9e-08 63.5 190 29.5
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 1.9e-08 63.5 190 29.5
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 1.9e-08 63.5 190 29.5
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 7.2e-08 61.6 110 36.4
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 1.2e-07 60.8 108 35.2
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 2.1e-07 60.1 190 28.9
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 4.0e-06 55.8 156 28.8


User provided reference genes

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