Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-94 349.4 185 100.0
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 2.9e-81 305.4 185 86.5
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 4.8e-52 208.4 187 62.0
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.9e-45 186.4 185 54.6
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 8.2e-44 181.0 185 53.5
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-42 176.8 144 61.8
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 5.9e-42 174.9 185 55.1
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.0e-33 147.5 185 45.9
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 8.8e-30 134.4 184 45.1
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.7e-28 129.0 175 44.0
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.8e-28 128.6 182 47.3
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 3.5e-26 122.5 185 43.2
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 8.5e-25 117.9 182 44.5
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.1e-24 117.5 185 42.7
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.9e-24 116.7 183 41.5
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.5e-24 116.3 188 41.5
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.4e-24 114.4 181 43.1
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.1e-23 113.2 182 42.9
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.7e-23 112.8 145 43.4
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.7e-23 112.8 182 44.0
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.7e-23 112.1 185 41.1
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.0e-22 110.9 182 40.1
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.0e-22 109.0 185 36.2
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 5.2e-22 108.6 185 40.5
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.8e-22 107.8 185 40.0
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 1.5e-21 107.1 178 41.0
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 2.0e-21 106.7 182 39.6
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 2.0e-21 106.7 182 39.0
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.6e-21 106.3 182 41.2
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 3.3e-21 105.9 184 41.3
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 4.4e-21 105.5 183 42.1
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 5.7e-21 105.1 178 40.4
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 5.7e-21 105.1 183 42.1
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 5.7e-21 105.1 182 39.0
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 9.7e-21 104.4 178 39.9
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 9.7e-21 104.4 178 39.9
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 9.7e-21 104.4 178 40.4
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 9.7e-21 104.4 178 39.9
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 2.2e-20 103.2 184 40.2
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 6.3e-20 101.7 185 37.8
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 8.2e-20 101.3 185 40.0
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.2e-20 101.3 182 37.4
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-19 100.1 185 39.5
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-19 100.1 185 39.5
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 1.8e-19 100.1 185 40.5
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 2.4e-19 99.8 182 39.6
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 3.1e-19 99.4 185 39.5
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 7.0e-19 98.2 185 37.3
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 1.6e-18 97.1 178 38.2
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 7.7e-18 94.7 182 39.0
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 2.9e-17 92.8 187 40.6
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.8e-17 92.4 182 38.5
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 5.0e-17 92.0 182 37.9
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 6.5e-17 91.7 179 40.2
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.1e-16 90.9 173 36.4
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.9e-16 90.1 182 39.0
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.5e-16 89.7 161 39.1
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.5e-16 89.7 182 38.5
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 6.1e-15 85.1 182 36.8
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.0e-14 84.3 188 34.6
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.4e-14 84.0 185 37.3
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.0e-14 82.8 173 32.9
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 6.8e-14 81.6 182 35.2
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 6.8e-14 81.6 185 33.0
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 6.8e-14 81.6 182 35.7
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 1.2e-13 80.9 168 37.5
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 1.3e-12 77.4 182 35.7
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 2.2e-12 76.6 182 35.2
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 2.8e-12 76.3 182 36.3
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 3.7e-12 75.9 182 36.3
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.7e-12 75.9 182 33.5
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 6.3e-12 75.1 184 32.6
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 2.4e-11 73.2 182 35.7
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 7.7e-10 68.2 184 31.5
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 2.3e-09 66.6 190 28.9
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 2.3e-09 66.6 190 28.4
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 2.9e-09 66.2 190 28.9
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.0e-09 65.5 117 37.6
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 1.5e-08 63.9 190 28.9
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 1.5e-08 63.9 190 28.9
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 2.5e-08 63.2 190 27.9
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 9.5e-08 61.2 106 37.7
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 4.7e-07 58.9 108 36.1
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 1.4e-06 57.4 155 28.4
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.4e-06 57.4 156 29.5
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-06 57.0 110 35.5


User provided reference genes

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