Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 7.1e-75 283.9 146 100.0
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-51 206.1 144 74.3
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 2.5e-43 179.1 144 61.8
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 2.4e-38 162.5 144 57.6
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.1e-22 107.5 143 42.7
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 7.7e-21 104.4 146 44.5
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.4e-19 100.1 143 39.2
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 5.7e-16 88.2 143 37.1
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.7e-16 87.4 143 37.8
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 8.2e-15 84.3 143 37.1
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.0e-14 81.3 140 37.1
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.1e-14 80.9 145 37.2
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-13 80.5 146 35.6
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 3.5e-13 79.0 142 34.5
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 3.5e-13 79.0 145 35.9
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.5e-13 78.6 140 33.6
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-12 77.4 142 33.8
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-12 77.4 142 33.8
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 1.0e-12 77.4 142 33.8
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 1.0e-12 77.4 142 33.8
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 1.0e-12 77.4 142 33.8
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 5.0e-12 75.1 141 31.9
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 6.5e-12 74.7 140 33.6
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 8.5e-12 74.3 146 34.2
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.1e-11 73.9 140 35.7
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-11 73.6 136 37.5
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 1.5e-11 73.6 144 34.7
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 1.9e-11 73.2 140 34.3
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 1.9e-11 73.2 140 34.3
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.9e-11 73.2 140 36.4
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 2.5e-11 72.8 136 35.3
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 3.2e-11 72.4 137 34.3
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.2e-11 72.0 139 35.3
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 5.5e-11 71.6 140 35.7
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 7.2e-11 71.2 134 35.1
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 1.6e-10 70.1 143 34.3
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 2.7e-10 69.3 139 35.3
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 2.7e-10 69.3 141 31.9
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.7e-10 69.3 140 32.9
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 3.6e-10 68.9 143 33.6
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.6e-10 68.9 140 35.7
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.7e-10 68.6 140 34.3
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 6.1e-10 68.2 136 33.1
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 6.1e-10 68.2 141 31.2
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 6.1e-10 68.2 140 35.0
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 8.0e-10 67.8 140 35.7
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 1.0e-09 67.4 141 31.2
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.0e-09 67.4 142 29.6
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-09 67.0 141 30.5
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.2e-09 65.1 136 31.6
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-08 63.5 140 33.6
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.7e-08 61.6 140 32.9
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 7.5e-08 61.2 138 31.2
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 9.7e-08 60.8 113 32.7
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 9.7e-08 60.8 141 34.0
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 3.7e-07 58.9 139 30.2
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 3.7e-07 58.9 139 30.2
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 6.3e-07 58.2 139 28.8
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.8e-06 56.6 139 28.8
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 1.8e-06 56.6 138 31.9
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 2.4e-06 56.2 140 31.4
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.1e-06 55.5 139 28.8
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 7.0e-06 54.7 140 35.0
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 9.1e-06 54.3 139 28.8


User provided reference genes

Program Settings