Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 4.5e-98 361.3 187 100.0
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 3.4e-53 212.2 187 62.0
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 3.1e-51 205.7 144 74.3
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 9.4e-48 194.1 187 57.8
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.3e-33 146.4 187 47.6
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-32 144.1 189 49.2
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-32 143.7 187 46.5
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.4e-22 110.5 187 38.5
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.4e-19 100.5 179 39.7
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.1e-19 99.0 184 40.2
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 9.2e-19 97.8 186 39.2
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 7.8e-18 94.7 184 38.0
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.3e-17 93.2 184 38.0
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.9e-16 90.1 181 38.1
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.3e-16 89.4 184 37.0
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-15 86.3 192 34.9
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.7e-15 85.5 146 37.7
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.7e-15 85.5 184 35.3
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.2e-15 85.1 190 34.7
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 6.2e-15 85.1 190 37.9
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 1.1e-14 84.3 185 36.2
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 1.1e-14 84.3 185 36.2
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.4e-14 84.0 190 34.7
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-14 84.0 186 34.4
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.2e-13 80.9 157 36.3
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.2e-13 80.9 187 33.7
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.2e-13 80.9 187 33.2
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 2.0e-13 80.1 184 33.7
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 2.0e-13 80.1 184 33.7
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.6e-13 79.7 187 33.7
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 3.4e-13 79.3 184 33.2
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 3.4e-13 79.3 184 33.2
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 3.4e-13 79.3 184 33.2
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 4.4e-13 79.0 184 33.7
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 9.9e-13 77.8 186 33.9
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-12 77.0 184 33.7
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.7e-12 77.0 187 32.1
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.2e-12 76.6 181 32.0
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 2.9e-12 76.3 187 33.7
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.7e-12 75.9 184 33.2
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 3.7e-12 75.9 189 32.8
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 4.9e-12 75.5 184 33.7
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 4.9e-12 75.5 184 34.2
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 6.4e-12 75.1 181 36.5
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 6.4e-12 75.1 187 34.2
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 8.4e-12 74.7 184 33.2
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 1.1e-11 74.3 187 33.2
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 1.4e-11 73.9 184 33.2
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.4e-11 73.9 184 34.2
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.4e-11 73.9 184 33.7
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-11 73.6 187 32.1
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.4e-11 73.2 188 32.4
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 2.4e-11 73.2 187 32.6
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 4.1e-11 72.4 185 32.4
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 4.1e-11 72.4 187 32.6
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 5.4e-11 72.0 187 32.1
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 5.4e-11 72.0 184 33.2
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 4.6e-10 68.9 189 34.9
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.0e-10 68.6 163 33.7
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 6.0e-10 68.6 185 31.4
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.0e-09 66.2 184 30.4
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 3.9e-09 65.9 182 31.3
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 3.9e-09 65.9 187 30.5
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 6.6e-09 65.1 181 32.6
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.9e-08 63.5 118 37.3
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.3e-08 62.8 184 33.7
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 3.3e-08 62.8 184 29.9
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 3.3e-08 62.8 184 30.4
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 4.3e-08 62.4 184 30.4
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 5.6e-08 62.0 184 30.4
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 2.8e-07 59.7 184 29.9
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.7e-07 58.9 191 31.4
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 6.2e-07 58.5 182 29.7


User provided reference genes

Program Settings