Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-89 332.4 177 100.0
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-60 236.1 174 73.0
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 4.3e-58 228.4 179 70.4
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 8.9e-56 220.7 177 67.2
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.6e-55 219.2 174 69.0
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 8.6e-51 204.1 177 65.0
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-50 203.8 178 64.6
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 8.1e-49 197.6 181 62.4
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 8.1e-49 197.6 177 63.3
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.2e-47 193.7 178 61.2
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.7e-46 189.9 177 62.1
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.4e-45 186.0 177 62.1
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.6e-44 183.3 174 60.3
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.0e-43 180.6 175 60.0
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-42 176.8 180 57.2
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 2.1e-41 172.9 177 57.1
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 3.6e-41 172.2 177 56.5
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 6.2e-41 171.4 177 55.9
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 8.1e-41 171.0 177 56.5
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.0e-40 168.7 180 54.4
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 9.9e-39 164.1 174 54.6
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 9.9e-39 164.1 174 54.6
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 6.0e-36 154.8 184 52.2
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 1.3e-35 153.7 174 50.6
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 5.1e-35 151.8 174 50.0
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 5.1e-35 151.8 174 50.0
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 5.1e-35 151.8 174 50.0
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 1.1e-34 150.6 174 50.0
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-34 150.6 179 49.7
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 3.3e-34 149.1 174 49.4
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-33 146.0 184 50.0
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 3.6e-33 145.6 175 48.6
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.6e-33 145.6 177 48.6
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 8.1e-33 144.4 184 48.9
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.8e-32 143.3 177 47.5
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.4e-32 142.9 175 49.7
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 6.9e-32 141.4 171 49.1
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-31 139.4 178 46.1
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 3.4e-31 139.0 182 48.9
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.5e-31 138.7 177 48.0
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 4.5e-31 138.7 178 46.1
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 6.4e-30 134.8 175 48.0
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.4e-29 132.9 177 46.3
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 5.4e-29 131.7 172 48.8
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.3e-29 131.0 168 47.6
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.2e-28 130.6 182 44.5
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.9e-27 125.6 179 41.3
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.9e-26 123.2 168 45.2
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.5e-26 122.9 152 43.4
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.5e-26 122.9 139 50.4
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.6e-26 120.9 177 41.2
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.3e-25 120.6 177 41.8
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-25 120.6 177 41.2
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 5.3e-24 115.2 164 46.3
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 2.0e-23 113.2 177 41.8
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.6e-23 112.8 177 40.1
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-22 110.9 178 41.0
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 2.5e-21 106.3 177 40.1
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.5e-21 106.3 177 36.7
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.5e-20 102.4 177 36.2
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 6.0e-20 101.7 180 39.4
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 7.9e-20 101.3 183 35.5
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.8e-19 100.1 176 36.4
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-18 97.1 185 39.5
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.9e-18 96.7 150 38.7
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 2.5e-18 96.3 186 35.5
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 3.3e-18 95.9 186 35.5
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 4.3e-18 95.5 185 37.3
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 5.7e-18 95.1 177 36.2
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 9.6e-18 94.4 186 34.9
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 9.6e-18 94.4 186 34.9
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 2.1e-17 93.2 186 34.9
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 3.7e-17 92.4 186 34.9
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 4.1e-16 89.0 177 35.0
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 6.9e-16 88.2 177 35.0
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 6.9e-16 88.2 177 35.0
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 9.0e-16 87.8 177 34.5
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 3.4e-15 85.9 177 34.5
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 3.4e-15 85.9 122 45.1
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-14 84.3 154 33.1
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 2.9e-14 82.8 177 31.6
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 3.2e-13 79.3 114 38.6
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 7.9e-12 74.7 105 40.0
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 7.9e-12 74.7 109 37.6
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 5.1e-11 72.0 75 65.3
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-10 70.1 189 32.8
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 5.7e-10 68.6 59 54.2
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 9.7e-10 67.8 103 38.8
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 5.3e-08 62.0 126 36.5
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-06 57.0 138 31.2


User provided reference genes

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