Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-90 335.9 177 100.0
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 9.2e-61 237.3 174 73.0
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 4.0e-48 195.3 170 62.4
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-47 193.4 172 64.5
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 2.7e-44 182.6 171 60.8
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.1e-42 177.2 170 59.4
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 5.6e-42 174.9 174 59.2
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.6e-41 173.3 171 58.5
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.6e-41 172.2 170 58.8
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.8e-41 171.8 170 58.8
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 8.1e-41 171.0 171 56.1
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 9.9e-39 164.1 170 57.6
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 1.1e-37 160.6 174 54.6
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-37 160.2 170 54.7
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 2.4e-37 159.5 174 54.0
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 3.2e-37 159.1 170 54.7
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 5.4e-37 158.3 173 52.0
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 7.1e-37 157.9 170 54.1
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 7.1e-37 157.9 170 54.1
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-36 157.1 171 52.6
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.2e-36 157.1 173 52.6
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 1.0e-35 154.1 170 52.9
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.0e-35 152.5 175 53.1
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 5.1e-35 151.8 170 52.4
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 5.1e-35 151.8 170 52.4
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 5.1e-35 151.8 170 52.9
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 5.1e-35 151.8 170 52.4
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 3.3e-34 149.1 170 51.8
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 9.6e-34 147.5 170 51.2
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.4e-32 143.7 177 48.6
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.4e-32 143.7 181 48.6
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.1e-32 142.5 173 49.7
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.8e-31 138.3 176 47.2
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 7.6e-31 137.9 173 48.6
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.3e-30 137.1 173 48.0
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.3e-30 137.1 173 47.4
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 3.2e-29 132.5 181 45.9
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 9.3e-29 131.0 173 46.2
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-27 126.7 174 46.0
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 3.0e-27 125.9 174 46.0
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 3.0e-27 125.9 171 45.6
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 3.9e-27 125.6 176 43.8
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 6.7e-27 124.8 176 46.6
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.6e-26 120.9 173 43.9
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.3e-25 120.6 173 43.4
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.8e-25 119.4 165 45.5
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.1e-24 117.5 175 40.6
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 3.1e-24 115.9 178 42.7
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.0e-24 115.5 175 41.1
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 6.9e-24 114.8 178 43.8
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 6.9e-24 114.8 173 41.6
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.5e-23 113.6 173 42.8
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 7.6e-23 111.3 146 41.8
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.7e-22 110.2 173 39.9
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.9e-22 109.4 165 43.0
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 6.5e-22 108.2 178 42.1
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.5e-21 106.3 132 47.0
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.2e-21 105.9 172 38.4
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.6e-20 103.6 173 38.7
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 2.7e-20 102.8 164 43.3
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 3.5e-20 102.4 173 38.7
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 7.9e-20 101.3 165 39.4
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.8e-19 100.1 176 37.5
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-19 100.1 151 41.7
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 3.3e-18 95.9 178 38.2
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 9.6e-18 94.4 178 38.8
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 2.1e-17 93.2 183 36.6
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 4.8e-17 92.0 183 36.6
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 4.8e-17 92.0 183 36.6
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 8.2e-17 91.3 183 36.1
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 1.1e-16 90.9 183 36.1
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 1.4e-16 90.5 183 36.6
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 2.4e-16 89.7 173 37.0
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 3.1e-16 89.4 173 37.0
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 3.1e-16 89.4 173 37.0
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 4.1e-16 89.0 173 36.4
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 1.2e-15 87.4 173 36.4
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 1.5e-15 87.0 155 35.5
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.5e-15 85.5 177 36.2
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-14 84.3 101 46.5
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 8.4e-14 81.3 105 41.9
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 3.2e-13 79.3 186 34.4
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 4.2e-13 79.0 173 34.1
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 2.3e-11 73.2 99 43.4
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.5e-10 70.5 105 36.2
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 3.3e-10 69.3 75 62.7
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-09 66.2 143 33.6
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 4.8e-09 65.5 126 39.7
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 1.8e-08 63.5 59 47.5


User provided reference genes

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