Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 3.2e-90 335.1 176 100.0
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-70 268.9 178 82.0
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 3.0e-56 222.2 177 67.2
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.3e-50 201.1 176 62.5
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.1e-48 195.7 171 61.4
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 4.0e-48 195.3 170 62.4
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 5.8e-47 191.4 178 62.4
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 5.4e-45 184.9 180 58.9
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.5e-44 182.2 176 58.5
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 8.6e-43 177.6 178 57.3
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.5e-42 176.8 170 59.4
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.9e-42 176.4 176 58.0
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.1e-41 172.9 176 56.2
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 3.6e-41 172.2 179 54.2
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.0e-40 168.7 173 55.5
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 1.2e-39 167.2 176 54.5
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-39 166.0 176 54.0
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-39 166.0 176 54.0
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 7.5e-39 164.5 176 53.4
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 8.3e-38 161.0 172 51.2
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.7e-36 156.0 179 50.3
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 1.7e-35 153.3 172 49.4
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 4.3e-34 148.7 170 48.8
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 1.6e-33 146.7 170 48.2
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 6.2e-33 144.8 170 47.6
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 6.2e-33 144.8 170 47.6
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 6.2e-33 144.8 170 47.6
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 6.2e-33 144.8 175 48.6
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-32 143.7 170 47.6
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.4e-32 142.9 177 48.6
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.7e-30 136.7 175 46.9
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.9e-30 136.0 184 46.7
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.9e-30 136.0 175 46.9
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 3.8e-30 135.6 175 45.7
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 8.4e-30 134.4 175 46.9
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 2.4e-29 132.9 178 44.4
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 7.1e-29 131.3 175 45.7
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.2e-29 131.0 184 44.6
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 1.2e-28 130.6 184 46.2
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 2.7e-28 129.4 181 45.3
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.7e-28 129.4 182 44.5
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 3.0e-27 125.9 174 43.7
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 5.1e-27 125.2 174 43.7
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 2.5e-26 122.9 173 44.5
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 8.1e-25 117.9 172 44.2
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 8.1e-25 117.9 177 40.7
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.4e-24 117.1 167 43.1
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.6e-23 112.8 151 41.1
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.4e-23 112.5 175 38.9
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 5.8e-23 111.7 175 39.4
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.2e-22 109.8 175 38.9
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.9e-22 108.6 167 39.5
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.1e-21 107.5 171 39.2
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 2.4e-21 106.3 156 41.7
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 2.4e-21 106.3 175 37.1
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 2.4e-21 106.3 172 37.8
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 5.4e-21 105.1 175 37.7
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-20 104.0 142 44.4
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.1e-20 103.2 175 36.0
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 3.5e-20 102.4 175 40.0
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 3.9e-19 99.0 185 40.5
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 6.6e-19 98.2 177 37.3
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-18 96.7 185 40.5
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 4.3e-18 95.5 182 36.8
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 5.6e-18 95.1 182 36.8
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 5.6e-18 95.1 182 36.8
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 7.3e-18 94.7 182 36.3
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 9.6e-18 94.4 182 36.3
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 1.3e-17 94.0 182 36.3
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.6e-17 92.4 175 36.0
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-16 90.5 177 35.6
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 6.9e-16 88.2 154 36.4
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-14 83.6 179 36.3
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.9e-14 82.8 116 40.5
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 2.9e-14 82.8 120 41.7
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 2.9e-14 82.8 150 34.0
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 1.3e-11 73.9 74 62.2
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 5.1e-11 72.0 110 36.4
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 1.1e-10 70.9 106 38.7
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-10 70.1 187 34.2
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 8.1e-09 64.7 102 38.2
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 3.1e-08 62.8 60 51.7
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 2.6e-07 59.7 140 33.6
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 5.8e-07 58.5 125 35.2


User provided reference genes

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