Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0747 Capsella rubella HOM05D032051 ORTHO05D021412 7.4e-213 743.8 431 100.0
Carub.0005s0866 Capsella rubella HOM05D012762 ORTHO05D011313 1.3e-111 407.5 405 60.5
Carub.0025s0005 Capsella rubella HOM05D000353 ORTHO05D021412 1.3e-97 360.9 266 76.3
Carub.0001s3690 Capsella rubella HOM05D000353 ORTHO05D021412 2.7e-74 283.5 317 53.6
Carub.0004s0703 Capsella rubella HOM05D032051 ORTHO05D021412 1.0e-44 185.3 174 78.7
Carub.0012s0008 Capsella rubella HOM05D000353 ORTHO05D010269 3.0e-41 173.7 158 58.2
Carub.0016s0005 Capsella rubella HOM05D000353 ORTHO05D000174 8.9e-41 172.2 145 63.4
AL4G17600 Arabidopsis lyrata HOM05D032051 ORTHO05D021412 1.3e-23 115.2 106 52.8
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.0e-16 91.3 395 31.4
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-15 88.6 407 28.3
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.7e-15 87.0 407 28.0
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.7e-15 87.0 413 27.4
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.4e-15 85.9 346 32.1
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.4e-15 85.9 407 27.8
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 5.4e-14 83.2 412 25.5
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.2e-13 82.0 394 27.9
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 1.7e-12 78.2 359 29.0
Carub.0001s3382 Capsella rubella HOM05D012762 ORTHO05D021412 4.7e-10 70.1 78 50.0
C02p36420 Brassica napus HOM05D000353 ORTHO05D000174 9.9e-08 62.4 96 36.5
BraA02t07160Z Brassica rapa HOM05D000353 ORTHO05D000174 6.4e-07 59.7 89 37.1
BcaC02g08031 Brassica carinata HOM05D000353 ORTHO05D014489 1.1e-06 58.9 80 36.2
A01p15610 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 58.2 90 35.6
C09p46820 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 58.2 84 38.1
BolC9t57531H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-06 58.2 90 35.6
AL3G33390 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 3.2e-06 57.4 336 29.8
BcaC04g20196 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 57.4 83 38.6
BcaB02g11010 Brassica carinata HOM05D000353 ORTHO05D000174 4.2e-06 57.0 82 35.4


User provided reference genes

Program Settings