Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0744 Capsella rubella HOM05D009980 ORTHO05D014334 1.4e-44 182.6 93 100.0
Thhalv10023920m.g Eutrema salsugineum HOM05D009980 ORTHO05D014334 4.1e-20 101.3 93 57.0
AL8G22160 Arabidopsis lyrata HOM05D009980 ORTHO05D014334 2.7e-19 98.6 85 57.6
AT5G48945 Arabidopsis thaliana HOM05D009980 ORTHO05D014334 3.5e-19 98.2 85 60.0
Thhalv10005194m.g Eutrema salsugineum HOM05D009980 ORTHO05D014334 1.1e-17 93.2 87 54.0
BolC7t44481H Brassica oleracea HOM05D009980 ORTHO05D014334 2.5e-17 92.0 93 48.4
C07p39570 Brassica napus HOM05D009980 ORTHO05D014334 3.3e-17 91.7 93 48.4
Carub.0008s0867 Capsella rubella HOM05D009980 ORTHO05D014334 7.3e-17 90.5 93 57.0
Sp2g19320 Schrenkiella parvula HOM05D009980 ORTHO05D014334 1.2e-16 89.7 93 51.6
BraA06t26783Z Brassica rapa HOM05D009980 ORTHO05D014334 1.4e-15 86.3 93 46.2
A06p38700 Brassica napus HOM05D009980 ORTHO05D014334 4.0e-15 84.7 93 46.2
BcaC06g30739 Brassica carinata HOM05D009980 ORTHO05D014334 8.4e-13 77.0 68 50.0
Carub.0007s2851 Capsella rubella HOM05D009980 ORTHO05D015953 3.9e-10 68.2 95 48.4
AL7G42540 Arabidopsis lyrata HOM05D009980 ORTHO05D015953 5.6e-09 64.3 94 42.6
Aa31csc310G20 Aethionema arabicum HOM05D009980 ORTHO05D014334 7.3e-09 63.9 81 44.4
Carub.0007s3057 Capsella rubella HOM05D017884 ORTHO05D023688 2.6e-06 55.5 91 44.0
Carub.0007s3056 Capsella rubella HOM05D017884 ORTHO05D023688 5.8e-06 54.3 81 44.4


User provided reference genes

Program Settings