Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0741 Capsella rubella HOM05D009492 ORTHO05D011693 0.0e+00 1245.7 657 100.0
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 2.4e-308 1061.6 682 85.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-296 1022.3 744 77.6
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 8.2e-264 913.7 717 70.9
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-242 843.2 703 70.3
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 2.4e-231 805.8 637 71.7
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 1.3e-229 800.0 625 73.0
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 5.7e-225 784.6 721 64.6
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-210 737.3 706 62.0
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-196 690.6 725 59.2
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 3.7e-179 632.5 621 61.4
Carub.0004s0637 Capsella rubella HOM05D009492 ORTHO05D011693 8.2e-171 604.7 558 66.3
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 6.9e-170 601.7 681 56.2
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 2.7e-150 536.6 658 50.9
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 7.2e-135 485.3 464 61.2
Carub.0002s0970 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-103 381.7 596 42.8
Carub.0003s2830 Capsella rubella HOM05D009492 ORTHO05D011693 2.9e-99 367.1 563 44.9
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 5.6e-95 352.8 707 39.5
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 9.9e-92 342.0 714 37.7
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 3.2e-66 257.3 558 34.8
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 7.1e-66 256.1 749 30.4
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 2.1e-62 244.6 720 30.0
AT2G15110 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.5e-58 231.1 616 31.7
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.5e-55 221.9 687 29.7
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 4.8e-46 190.3 640 28.4
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.3e-38 165.6 612 27.5
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 8.2e-38 162.9 284 38.0
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.6e-12 79.0 227 26.4
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.7e-11 75.5 132 31.8
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.5e-11 73.2 123 32.5
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-10 72.4 123 31.7
AT2G11010 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.5e-10 72.4 173 30.1
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.9e-10 72.0 123 31.7
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.7e-09 67.4 667 22.9
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-06 58.9 364 24.5
AL5G19630 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-06 58.2 641 22.5
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-06 57.0 156 28.2
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 8.3e-06 56.6 181 23.8


User provided reference genes

Program Settings