Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 1.4e-69 266.2 133 100.0
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 1.7e-35 152.9 133 59.4
Carub.0007s3110 Capsella rubella HOM05D010286 ORTHO05D000309 7.7e-28 127.5 122 53.3
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 4.4e-23 111.7 130 46.2
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 2.8e-22 109.0 104 49.0
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.8e-19 98.6 140 40.7
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.8e-19 98.6 140 40.7
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 5.0e-19 98.2 142 38.0
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.5e-18 96.7 140 39.3
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.9e-18 96.3 140 39.3
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.9e-18 96.3 140 39.3
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.2e-17 93.6 140 37.9
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 3.6e-17 92.0 127 39.4
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.4e-16 90.1 140 37.9
AL3G51480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.3e-16 89.4 142 35.9
AL8G20120 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.9e-16 87.4 86 51.2
AL3G51240 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.5e-15 86.7 140 37.1
AL4G17480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.7e-14 83.2 76 52.6
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-14 82.4 86 45.3
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 9.2e-13 77.4 86 44.2
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 3.5e-12 75.5 89 42.7
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-11 72.0 85 44.7
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-11 72.0 94 40.4
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 5.6e-10 68.2 100 38.0
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-09 66.6 83 41.0
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 2.1e-09 66.2 100 33.0
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-09 65.9 103 34.0
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-09 65.9 103 34.0
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-09 65.9 103 34.0
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-09 65.1 103 34.0
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-09 64.7 103 34.0
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 8.0e-09 64.3 103 33.0
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 8.0e-09 64.3 96 36.5
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 1.4e-08 63.5 83 38.6
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 101 34.7
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 1.8e-08 63.2 96 35.4
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-08 62.8 88 38.6
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 3.1e-08 62.4 87 34.5
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-08 62.0 83 37.3
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-08 62.0 83 38.6
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 8.9e-08 60.8 82 40.2
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 8.9e-08 60.8 94 36.2
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 1.2e-07 60.5 88 36.4
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-07 60.5 87 39.1
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 3.4e-07 58.9 83 37.3
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 5.8e-07 58.2 83 39.8
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 5.8e-07 58.2 94 33.0
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 7.5e-07 57.8 83 38.6
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 7.5e-07 57.8 86 34.9
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 7.5e-07 57.8 88 36.4
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 9.8e-07 57.4 86 37.2
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 9.8e-07 57.4 132 34.1
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 9.8e-07 57.4 132 34.1
CiPaw.09G001000 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-06 56.6 55 45.5
CiPaw.11G103900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-06 56.6 58 41.4
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 2.2e-06 56.2 116 33.6
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 2.9e-06 55.8 88 34.1
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-06 55.8 77 40.3
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.9e-06 55.8 118 28.8
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 2.9e-06 55.8 132 33.3
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 2.9e-06 55.8 132 33.3
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 2.9e-06 55.8 132 33.3
CARHR186880 Cardamine hirsuta HOM05D010286 ORTHO05D000309 3.7e-06 55.5 118 32.2
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.7e-06 55.5 120 29.2
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.7e-06 55.5 120 29.2
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 6.4e-06 54.7 80 33.8
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 8.3e-06 54.3 132 33.3
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 8.3e-06 54.3 116 28.4


User provided reference genes

Program Settings