Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0709 Capsella rubella HOM05D000496 ORTHO05D000411 3.7e-79 298.1 147 100.0
AL65U10010 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 2.4e-30 136.0 80 86.2
CARHR119160 Cardamine hirsuta HOM05D000496 ORTHO05D000411 6.8e-25 117.9 80 75.0
AL8G19210 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 4.1e-22 108.6 67 83.6
BcaC04g21193 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-10 69.3 54 61.1
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 4.7e-10 68.6 53 56.6
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 1.0e-09 67.4 74 48.6
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-09 67.4 56 57.1
CARHR153360 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.0e-09 67.4 44 72.7
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.0e-09 67.4 76 46.1
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 67.0 54 59.3
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-09 67.0 54 55.6
AT5G40595 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 3.1e-09 65.9 117 37.6
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-09 65.9 54 57.4
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-09 64.7 72 45.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-09 64.7 54 59.3
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-09 64.3 51 58.8
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-09 64.3 54 57.4
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.9e-09 64.3 82 39.0
Thhalv10028246m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.9e-09 64.3 51 56.9
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 63.9 54 57.4
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 63.9 56 51.8
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 63.9 51 52.9
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-08 63.9 82 39.0
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-08 63.9 82 39.0
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-08 63.5 75 41.3
BcaC03g16657 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-08 63.5 51 58.8
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-08 63.5 76 46.1
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-08 63.5 56 51.8
BcaB03g16361 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-08 63.2 54 53.7
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-08 63.2 124 36.3
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 2.6e-08 62.8 72 44.4
Thhalv10027058m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.6e-08 62.8 51 54.9
Sp5g18290 Schrenkiella parvula HOM05D008211 ORTHO05D000411 2.6e-08 62.8 64 48.4
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-08 62.4 51 56.9
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-08 62.4 133 33.8
Carub.0008s0594 Capsella rubella HOM05D000496 ORTHO05D000411 3.4e-08 62.4 86 44.2
Thhalv10000620m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-08 62.4 75 42.7
Thhalv10002274m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-08 62.4 75 41.3
Thhalv10011945m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-08 62.4 50 54.0
Sp3g23630 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.4e-08 62.4 56 53.6
Sp7g09900 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.4e-08 62.4 64 51.6
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-08 62.0 54 51.9
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-08 62.0 54 55.6
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-08 62.0 54 55.6
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 4.4e-08 62.0 78 42.3
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.4e-08 62.0 76 44.7
Sp4g07540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.4e-08 62.0 74 43.2
SpUn0002_0030 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.4e-08 62.0 73 46.6
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-08 61.6 51 56.9
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.8e-08 61.6 53 52.8
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-08 61.2 51 56.9
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-08 61.2 39 66.7
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-08 61.2 51 51.0
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-08 61.2 99 38.4
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 7.5e-08 61.2 80 41.2
C03p14600 Brassica napus HOM05D000496 ORTHO05D000411 7.5e-08 61.2 80 41.2
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 7.5e-08 61.2 136 31.6
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-08 60.8 54 55.6
BcaC02g09783 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-08 60.8 74 41.9
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-08 60.8 79 44.3
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-08 60.8 73 46.6
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 9.8e-08 60.8 73 43.8
Sp1g33610 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.8e-08 60.8 75 46.7
Sp6g09290 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.3e-07 60.5 75 42.7
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 60.1 54 53.7
BolC5t32675H Brassica oleracea HOM05D000496 ORTHO05D000411 1.7e-07 60.1 51 54.9
CARHR261370 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.7e-07 60.1 41 58.5
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-07 60.1 76 39.5
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-07 59.7 95 38.9
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-07 59.7 51 51.0
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-07 59.7 78 41.0
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-07 59.7 51 54.9
Thhalv10005542m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-07 59.7 74 43.2
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-07 59.7 56 50.0
Thhalv10027079m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-07 59.7 67 40.3
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.2e-07 59.7 56 48.2
BcaB07g31293 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 59.3 68 48.5
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 59.3 51 54.9
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 59.3 54 51.9
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 59.3 51 54.9
C06p42420 Brassica napus HOM05D000496 ORTHO05D000411 2.9e-07 59.3 51 52.9
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 2.9e-07 59.3 51 54.9
BolC8t47690H Brassica oleracea HOM05D000496 ORTHO05D000411 2.9e-07 59.3 54 50.0
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 2.9e-07 59.3 93 41.9
Thhalv10003487m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.9e-07 59.3 67 41.8
Sp1g29320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.9e-07 59.3 73 45.2
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 3.7e-07 58.9 54 51.9
Thhalv10026902m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.7e-07 58.9 41 58.5
Thhalv10027529m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.7e-07 58.9 53 49.1
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-07 58.5 49 57.1
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-07 58.5 55 52.7
BcaB06g27535 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-07 58.5 54 51.9
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-07 58.5 54 53.7
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 4.9e-07 58.5 106 38.7
Thhalv10001142m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.9e-07 58.5 51 54.9
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.9e-07 58.5 56 46.4
Sp6g11020 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.9e-07 58.5 51 51.0
Sp7g03480 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.9e-07 58.5 90 37.8
BcaB02g06959 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-07 58.2 135 36.3
BcaB05g24301 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-07 58.2 81 35.8
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-07 58.2 51 51.0
BcaC06g35904 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-07 58.2 54 51.9
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 6.4e-07 58.2 54 50.0
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 6.4e-07 58.2 54 50.0
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 6.4e-07 58.2 46 58.7
Thhalv10012328m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.4e-07 58.2 69 44.9
Sp5g18410 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.4e-07 58.2 79 43.0
BcaC01g02265 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-07 57.8 48 56.2
Sp5g17960 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.3e-07 57.8 56 48.2
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.3e-07 57.8 79 41.8
BcaC09g49845 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 57.4 75 34.7
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 1.1e-06 57.4 73 42.5
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 1.1e-06 57.4 70 42.9
Thhalv10003397m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-06 57.4 54 50.0
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-06 57.4 67 35.8
Sp4g05320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-06 57.4 98 37.8
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-06 57.0 51 51.0
Sp3g26540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.4e-06 57.0 69 43.5
SpUn0001_0770 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.4e-06 57.0 41 61.0
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 56.6 54 48.1
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 56.6 73 41.1
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 56.6 51 47.1
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 56.6 41 61.0
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 56.6 54 51.9
Thhalv10003335m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.4e-06 56.2 41 56.1
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.4e-06 56.2 39 56.4
Sp3g24940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.4e-06 56.2 67 44.8
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 55.8 109 36.7
BcaB07g33419 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 55.8 39 61.5
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 3.2e-06 55.8 39 59.0
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-06 55.5 107 41.1
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.1e-06 55.5 56 46.4
Sp6g12660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.1e-06 55.5 55 50.9
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-06 55.1 39 61.5
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 5.4e-06 55.1 62 43.5
BcaB01g01299 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-06 54.7 54 50.0
BcaB05g24503 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-06 54.7 51 49.0
BcaC01g02202 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-06 54.7 77 33.8
C01p43360 Brassica napus HOM05D000496 ORTHO05D000411 7.0e-06 54.7 81 32.1
Sp2g04370 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.0e-06 54.7 61 45.9
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.0e-06 54.7 54 48.1
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 9.2e-06 54.3 39 59.0
Thhalv10005429m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.2e-06 54.3 54 48.1


User provided reference genes

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