Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 4.4e-52 207.6 99 100.0
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.3e-29 132.1 93 66.7
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.5e-28 129.4 90 62.2
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.4e-26 122.9 90 60.0
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.4e-26 122.1 93 61.3
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-23 113.2 92 58.7
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 1.6e-22 109.4 90 52.2
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.6e-20 102.1 92 51.1
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.6e-20 102.1 92 51.1
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 5.8e-20 100.9 87 54.0
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 5.8e-20 100.9 87 54.0
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 9.8e-20 100.1 74 63.5
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-19 99.8 87 54.0
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 2.9e-19 98.6 91 54.9
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.7e-19 98.2 91 53.8
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 8.3e-19 97.1 91 53.8
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 1.4e-18 96.3 86 50.0
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 3.2e-18 95.1 90 51.1
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 1.2e-17 93.2 87 54.0
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-17 92.8 86 50.0
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 7.8e-17 90.5 92 46.7
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 7.8e-17 90.5 92 47.8
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 3.9e-16 88.2 85 47.1
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.1e-15 86.7 86 47.7
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 2.5e-15 85.5 82 46.3
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 3.3e-15 85.1 94 43.6
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 7.3e-15 84.0 82 47.6
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.2e-14 83.2 82 48.8
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 2.1e-14 82.4 66 56.1
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 4.7e-14 81.3 85 45.9
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 4.7e-14 81.3 71 52.1
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 4.7e-14 81.3 82 45.1
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.7e-14 81.3 91 44.0
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-13 80.1 80 47.5
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-13 80.1 106 41.5
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-13 80.1 106 41.5
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 3.1e-13 78.6 83 47.0
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 4.0e-13 78.2 94 41.5
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 4.0e-13 78.2 65 53.8
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.0e-13 78.2 96 39.6
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 6.8e-13 77.4 57 57.9
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 6.8e-13 77.4 86 44.2
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 8.9e-13 77.0 73 47.9
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-12 76.3 61 55.7
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-12 76.3 57 57.9
BolC4t28282H Brassica oleracea HOM05D007693 ORTHO05D002086 2.0e-12 75.9 87 42.5
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.4e-12 75.1 64 53.1
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 3.4e-12 75.1 93 43.0
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 3.4e-12 75.1 62 53.2
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 3.4e-12 75.1 94 41.5
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 7.5e-12 73.9 60 53.3
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 7.5e-12 73.9 60 53.3
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 9.9e-12 73.6 101 38.6
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-11 73.2 94 42.6
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-11 73.2 94 40.4
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-11 73.2 94 40.4
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 1.7e-11 72.8 93 41.9
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.7e-11 72.8 60 53.3
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-11 72.4 93 41.9
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-11 72.4 78 41.0
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-11 72.0 92 41.3
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-11 72.0 68 47.1
C06p36600 Brassica napus HOM05D007693 ORTHO05D002086 2.9e-11 72.0 87 41.4
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 3.7e-11 71.6 94 40.4
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 4.9e-11 71.2 81 42.0
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.4e-11 70.9 64 48.4
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.4e-10 69.7 63 50.8
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 7.1e-10 67.4 63 49.2
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-09 66.2 67 46.3
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.5e-09 65.1 106 34.9
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 4.6e-09 64.7 61 44.3
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 7.8e-09 63.9 52 50.0
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.3e-08 63.2 53 49.1
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 3.0e-08 62.0 81 40.7
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 1.9e-07 59.3 65 41.5
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 3.3e-07 58.5 81 39.5
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 5.6e-07 57.8 64 43.8
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 5.6e-07 57.8 59 40.7
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 9.5e-07 57.0 81 38.3
AL6G38570 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-06 56.6 111 35.1
BolC9t55840H Brassica oleracea HOM05D007693 ORTHO05D002086 2.8e-06 55.5 37 62.2
BcaB07g32457 Brassica carinata HOM05D007462 ORTHO05D002086 3.6e-06 55.1 63 41.3
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 8.1e-06 53.9 66 40.9


User provided reference genes

Program Settings