Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0700 Capsella rubella HOM05D001224 ORTHO05D003542 2.6e-109 398.7 190 100.0
Carub.0003s2180 Capsella rubella HOM05D001224 ORTHO05D003542 1.8e-17 93.6 182 31.9
BolC7t41037H Brassica oleracea HOM05D001224 ORTHO05D003542 3.9e-09 65.9 131 34.4
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-09 65.5 167 27.5
BcaC02g11931 Brassica carinata HOM05D001224 ORTHO05D003542 8.8e-09 64.7 118 31.4
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-08 63.9 168 27.4
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-08 63.9 167 28.1
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 2.0e-08 63.5 163 27.6
BcaC05g26485 Brassica carinata HOM05D001224 ORTHO05D003542 3.3e-08 62.8 119 31.1
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 4.4e-08 62.4 167 26.9
C04p47860 Brassica napus HOM05D001224 ORTHO05D003542 4.4e-08 62.4 168 30.4
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 4.4e-08 62.4 165 27.9
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 5.7e-08 62.0 167 27.5
BcaC06g36232 Brassica carinata HOM05D001224 ORTHO05D003542 7.4e-08 61.6 131 32.8
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 7.4e-08 61.6 167 27.5
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 7.4e-08 61.6 167 27.5
C07p06200 Brassica napus HOM05D001224 ORTHO05D003542 7.4e-08 61.6 131 32.8
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 9.7e-08 61.2 167 26.9
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 3.7e-07 59.3 167 26.3
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 3.7e-07 59.3 167 26.9
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 3.7e-07 59.3 167 26.9
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 4.8e-07 58.9 165 25.5
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 4.8e-07 58.9 178 24.2
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 4.8e-07 58.9 178 24.2
C07p05290 Brassica napus HOM05D001224 ORTHO05D003542 6.3e-07 58.5 140 27.1
C09p42280 Brassica napus HOM05D001224 ORTHO05D003542 6.3e-07 58.5 140 27.9
BolC9t57106H Brassica oleracea HOM05D001224 ORTHO05D003542 6.3e-07 58.5 140 27.9
BcaB07g32746 Brassica carinata HOM05D001224 ORTHO05D003542 8.2e-07 58.2 131 32.8
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-06 57.8 167 26.3
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-06 57.8 167 26.3
BolC7t40929H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-06 57.8 140 27.1
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-06 57.0 167 26.9
A01p28550 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-06 56.6 131 29.0
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-06 56.6 137 26.3
BcaC01g01871 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-06 56.2 91 30.8
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 3.1e-06 56.2 137 25.5
BraA01t03047Z Brassica rapa HOM05D001224 ORTHO05D003542 3.1e-06 56.2 131 29.0
BcaC06g36233 Brassica carinata HOM05D001224 ORTHO05D003542 4.1e-06 55.8 94 31.9
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-06 55.5 137 26.3
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 7.0e-06 55.1 127 30.7
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 7.0e-06 55.1 178 23.6
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 7.0e-06 55.1 137 25.5
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 7.0e-06 55.1 136 25.7
AL9U11170 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 9.1e-06 54.7 120 28.3
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 9.1e-06 54.7 138 26.8
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 9.1e-06 54.7 137 25.5
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 9.1e-06 54.7 147 25.9
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 9.1e-06 54.7 129 27.9


User provided reference genes

Program Settings