Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.7e-224 782.3 384 100.0
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 4.4e-201 704.5 384 89.3
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.2e-195 686.4 385 87.5
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 2.6e-185 652.1 384 81.8
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 3.8e-184 648.3 381 82.7
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 3.2e-183 645.2 384 82.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 7.1e-183 644.0 384 82.0
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 9.3e-183 643.7 384 82.6
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 1.5e-180 636.3 384 81.8
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 3.6e-179 631.7 385 81.6
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 3.6e-179 631.7 385 81.6
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.2e-166 590.1 382 75.1
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.1e-159 567.0 355 77.2
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 6.5e-152 541.2 384 67.7
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 2.4e-146 522.7 384 65.6
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 2.9e-144 515.8 384 64.6
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.0e-144 515.0 384 64.1
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.7e-142 509.2 384 64.1
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 6.1e-142 508.1 384 64.6
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.3e-139 500.4 384 62.2
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.7e-139 500.0 384 63.3
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 3.7e-139 498.8 382 61.8
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 6.3e-139 498.0 384 62.2
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 8.2e-139 497.7 384 62.0
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 1.1e-138 497.3 383 62.7
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.4e-138 496.9 384 62.0
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.4e-138 496.9 384 62.2
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.0e-137 493.0 384 61.7
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 7.7e-137 491.1 376 61.7
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.0e-136 490.7 382 61.8
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 8.5e-136 487.6 381 61.9
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.9e-135 486.5 382 61.8
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 3.2e-135 485.7 384 61.2
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 4.7e-134 481.9 384 60.2
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.0e-133 480.7 381 60.6
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 3.0e-133 479.2 382 60.5
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.0e-132 476.5 416 56.7
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 2.2e-131 473.0 431 56.4
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 2.8e-131 472.6 379 60.7
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 3.7e-131 472.2 383 60.1
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 6.3e-131 471.5 384 59.9
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 6.3e-131 471.5 381 60.6
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 8.2e-131 471.1 375 62.1
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 8.2e-131 471.1 366 61.7
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 9.1e-130 467.6 379 60.9
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.6e-129 466.8 378 61.1
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 2.0e-129 466.5 379 61.2
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.6e-129 466.1 382 59.9
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.6e-129 466.1 382 59.9
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 7.7e-129 464.5 383 60.1
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 1.3e-128 463.8 382 59.2
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.2e-128 463.0 379 60.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 2.9e-128 462.6 383 59.3
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 5.0e-128 461.8 383 59.3
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.5e-127 460.3 378 60.8
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.5e-127 460.3 384 59.1
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.2e-126 457.2 381 59.8
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.2e-126 457.2 378 61.1
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 8.0e-126 454.5 382 58.9
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 8.0e-126 454.5 382 58.1
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.0e-125 454.1 385 60.0
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.0e-125 454.1 380 59.2
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 4.0e-125 452.2 366 62.6
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.1e-124 450.7 366 62.6
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.1e-124 450.7 401 57.1
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.6e-124 449.5 382 58.4
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.6e-124 449.5 380 58.2
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 5.7e-124 448.4 378 59.3
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.2e-123 446.4 378 57.9
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 4.8e-123 445.3 378 56.3
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.8e-122 443.4 389 56.3
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 3.1e-122 442.6 378 57.1
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 5.9e-121 438.3 376 57.7
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 3.8e-120 435.6 384 56.0
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 6.5e-120 434.9 357 59.9
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 9.4e-119 431.0 385 56.9
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 2.1e-118 429.9 361 58.7
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 4.0e-117 425.6 382 54.7
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.7e-115 420.2 378 57.4
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.8e-115 419.5 378 57.1
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.0e-113 413.3 378 56.9
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.3e-112 410.6 383 53.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 8.8e-109 397.9 381 51.4
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.7e-108 395.2 380 53.4
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 3.7e-107 392.5 334 60.5
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 6.3e-107 391.7 283 66.4
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.1e-106 391.0 375 52.3
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 5.4e-106 388.7 378 48.7
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 5.4e-106 388.7 378 51.6
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.3e-104 384.0 218 83.9
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.5e-103 380.6 383 50.7
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.5e-103 380.6 379 50.1
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 2.5e-103 379.8 382 50.8
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 5.6e-103 378.6 361 53.2
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 9.5e-103 377.9 307 61.6
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 3.6e-102 375.9 331 57.7
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 6.1e-102 375.2 384 51.6
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.8e-101 373.6 308 61.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 5.2e-101 372.1 377 50.4
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.3e-99 367.5 401 49.9
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 7.8e-97 358.2 260 67.3
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 3.0e-96 356.3 289 63.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.9e-95 353.6 382 50.0
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.0e-88 331.3 400 46.2
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 3.3e-87 326.2 310 55.2
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 3.2e-82 309.7 381 43.0
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 9.2e-82 308.1 342 48.2
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 9.2e-82 308.1 288 53.5
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 7.8e-81 305.1 226 64.6
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 2.3e-80 303.5 385 43.6
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 7.3e-79 298.5 277 54.9
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 5.2e-77 292.4 370 43.2
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.6e-70 270.8 383 37.3
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.8e-61 240.7 393 35.1
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 5.3e-61 239.2 183 59.6
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 3.1e-53 213.4 199 53.3
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 6.2e-46 189.1 164 57.3
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.7e-35 154.5 153 51.6
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 8.5e-27 125.6 97 66.0
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 1.4e-24 118.2 115 52.2
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.6e-23 114.0 214 35.5
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 9.1e-21 105.5 117 47.9
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 1.0e-11 75.5 48 60.4
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 1.0e-11 75.5 77 48.1
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.1e-10 72.0 139 30.9


User provided reference genes

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