Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 1.7e-85 319.3 159 100.0
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 4.5e-75 284.6 159 90.6
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 4.2e-65 251.5 165 78.2
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 4.2e-65 251.5 165 78.8
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 6.3e-61 237.7 167 71.3
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.4e-60 236.5 166 73.5
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.7e-59 232.3 166 72.3
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 6.6e-58 227.6 166 71.7
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.1e-57 226.9 171 70.8
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.5e-57 226.5 167 71.3
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 7.2e-57 224.2 169 69.8
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.8e-55 219.5 162 70.4
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 5.7e-54 214.5 170 68.2
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.1e-52 210.3 173 64.2
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.4e-44 183.3 179 58.7
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 3.2e-44 182.2 174 57.5
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 9.2e-44 180.6 176 58.5
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 9.2e-44 180.6 162 61.7
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-43 179.1 162 61.1
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 2.7e-43 179.1 162 61.1
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 7.8e-43 177.6 159 61.6
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 3.9e-42 175.3 181 58.0
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-41 173.7 181 58.0
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 2.5e-41 172.6 171 57.9
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 2.5e-41 172.6 171 57.9
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 3.3e-41 172.2 167 56.3
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 3.3e-41 172.2 185 55.1
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 5.6e-41 171.4 170 58.8
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 7.3e-41 171.0 172 57.6
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 7.3e-41 171.0 172 57.6
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 7.3e-41 171.0 172 57.6
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 7.3e-41 171.0 172 57.6
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 9.5e-41 170.6 185 54.6
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 9.5e-41 170.6 173 57.8
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-40 170.2 171 57.9
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-40 170.2 171 57.9
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 2.1e-40 169.5 172 56.4
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 2.1e-40 169.5 173 57.8
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 4.7e-40 168.3 170 58.2
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 6.2e-40 167.9 173 57.2
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 6.2e-40 167.9 181 56.4
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 1.1e-39 167.2 172 56.4
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-39 167.2 184 54.9
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 1.8e-39 166.4 170 57.6
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.8e-39 166.4 167 55.7
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 3.1e-39 165.6 175 54.3
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 3.1e-39 165.6 171 56.1
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 6.8e-39 164.5 180 53.9
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 2.0e-38 162.9 183 54.1
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 2.6e-38 162.5 180 53.9
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 2.6e-38 162.5 170 56.5
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 2.6e-38 162.5 170 56.5
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 3.4e-38 162.2 173 56.6
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 4.4e-38 161.8 161 54.0
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 5.8e-38 161.4 175 54.9
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 5.8e-38 161.4 175 54.9
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 5.8e-38 161.4 175 54.9
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 5.8e-38 161.4 129 66.7
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 6.4e-37 157.9 177 53.1
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 6.4e-37 157.9 177 53.1
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 6.4e-37 157.9 177 53.1
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 6.4e-37 157.9 177 53.1
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-36 157.1 171 55.0
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 2.4e-36 156.0 191 47.6
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.4e-36 154.8 177 52.0
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 7.1e-36 154.5 175 52.0
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-35 153.7 198 49.5
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-34 149.4 190 46.3
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 1.2e-32 143.7 163 52.1
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-32 142.1 154 53.9
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.1e-31 140.6 160 51.2
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 3.1e-31 139.0 162 51.9
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 5.8e-30 134.8 139 57.6
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.3e-29 133.7 165 50.3
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.7e-29 133.3 162 50.6
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-28 130.6 154 50.6
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-28 130.6 154 50.6
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-28 130.6 154 50.6
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-28 130.2 157 49.7
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-28 130.2 154 50.6
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.2e-27 127.1 158 46.8
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.2e-27 127.1 155 49.0
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.8e-23 111.3 152 44.7
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 3.0e-18 95.9 130 50.8
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 5.1e-18 95.1 158 39.9
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-17 94.0 134 42.5
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 4.3e-17 92.0 164 37.2
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 5.6e-17 91.7 89 52.8
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 5.6e-17 91.7 164 37.2
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 1.3e-16 90.5 150 38.7
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.6e-16 90.1 148 38.5
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 8.1e-16 87.8 159 37.1
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 2.4e-15 86.3 90 52.2
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 5.3e-15 85.1 62 72.6
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 5.3e-15 85.1 157 36.9
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 6.9e-15 84.7 153 35.3
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 1.2e-14 84.0 161 35.4
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 2.6e-14 82.8 62 72.6
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.3e-13 80.5 141 38.3
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 6.4e-13 78.2 139 36.0
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.4e-12 76.3 74 58.1
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 4.2e-12 75.5 75 53.3
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.0e-10 70.9 142 34.5
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 1.0e-10 70.9 152 32.9
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 2.3e-10 69.7 139 33.1
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.9e-10 68.9 141 33.3
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 5.1e-10 68.6 139 32.4
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 8.7e-10 67.8 142 28.2
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 1.9e-09 66.6 139 32.4
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 4.3e-09 65.5 118 32.2
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.6e-08 62.4 142 32.4
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 6.2e-08 61.6 141 30.5
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 6.2e-08 61.6 129 32.6
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 6.2e-08 61.6 160 29.4
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 8.1e-08 61.2 141 31.9
Potri.011G134600 Populus trichocarpa HOM05D006536 ORTHO05D005877 1.1e-07 60.8 150 31.3
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.4e-07 59.7 161 29.2
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 2.4e-07 59.7 110 35.5
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 4.0e-07 58.9 138 29.0
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 6.9e-07 58.2 150 32.0
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 9.0e-07 57.8 149 33.6
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 2.0e-06 56.6 144 29.2
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 3.4e-06 55.8 114 29.8
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 4.5e-06 55.5 150 30.7
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.8e-06 55.1 149 32.2
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 7.6e-06 54.7 148 29.7
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 9.9e-06 54.3 151 30.5


User provided reference genes

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