Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0612 Capsella rubella HOM05D012410 ORTHO05D014333 2.6e-59 231.9 117 100.0
AT5G42785 Arabidopsis thaliana HOM05D012410 ORTHO05D014333 3.7e-42 174.9 117 80.3
CARHR181750 Cardamine hirsuta HOM05D012410 ORTHO05D014333 5.4e-41 171.0 118 77.1
BcaB07g31045 Brassica carinata HOM05D012410 ORTHO05D014333 4.7e-29 131.3 120 65.0
A09p19970 Brassica napus HOM05D012410 ORTHO05D014333 6.1e-29 131.0 121 63.6
BraA09t37606Z Brassica rapa HOM05D012410 ORTHO05D014333 6.1e-29 131.0 121 63.6
Thhalv10003407m.g Eutrema salsugineum HOM05D012410 ORTHO05D014333 3.4e-27 125.2 119 61.3
BolC9t55432H Brassica oleracea HOM05D012410 ORTHO05D014333 3.7e-26 121.7 121 61.2
BcaC04g21971 Brassica carinata HOM05D012410 ORTHO05D014333 4.9e-26 121.3 120 61.7
Sp2g07440 Schrenkiella parvula HOM05D012410 ORTHO05D014333 6.4e-26 120.9 121 62.0
C09p25320 Brassica napus HOM05D012410 ORTHO05D014333 1.4e-25 119.8 121 60.3
AL8G18290 Arabidopsis lyrata HOM05D012410 ORTHO05D014333 1.0e-23 113.6 115 54.8
Aa31LG9G12850 Aethionema arabicum HOM05D012410 ORTHO05D014333 7.0e-17 90.9 122 50.8
THA.LOC104801916 Tarenaya hassleriana HOM05D012410 ORTHO05D014333 3.5e-16 88.6 110 53.6
Cpa.g.sc123.50 Carica papaya HOM05D008807 ORTHO05D010580 5.6e-06 54.7 79 41.8


User provided reference genes

Program Settings