Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.9e-81 305.8 158 100.0
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 6.5e-74 280.8 160 92.5
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 7.2e-73 277.3 159 93.1
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.9e-71 271.6 158 89.2
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 5.9e-67 257.7 159 88.1
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.0e-66 256.9 161 87.6
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.3e-66 256.5 159 88.1
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 3.8e-66 255.0 159 88.7
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 8.5e-66 253.8 159 86.8
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 4.7e-64 248.1 157 85.4
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 4.7e-64 248.1 159 85.5
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 4.7e-64 248.1 159 85.5
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.1e-57 226.9 160 78.8
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 3.7e-53 211.8 163 73.6
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.6e-51 206.5 162 71.6
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.5e-51 205.3 164 70.7
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 7.7e-51 204.1 164 71.3
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 7.7e-51 204.1 164 71.3
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 7.7e-51 204.1 164 71.3
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 7.7e-51 204.1 127 83.5
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.7e-50 203.0 162 72.8
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.7e-50 203.0 118 88.1
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 5.0e-50 201.4 159 72.3
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 1.1e-49 200.3 158 72.2
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.5e-49 199.9 136 79.4
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.5e-49 199.9 117 87.2
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.9e-49 199.5 160 71.2
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.9e-49 199.5 159 73.6
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.9e-49 199.5 164 72.0
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.5e-49 199.1 162 70.4
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.5e-49 199.1 118 86.4
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 3.2e-49 198.7 142 76.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 4.2e-49 198.4 160 72.5
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 4.2e-49 198.4 142 76.8
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 5.5e-49 198.0 162 71.0
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 5.5e-49 198.0 160 71.2
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 5.5e-49 198.0 158 71.5
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 5.5e-49 198.0 119 85.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 5.5e-49 198.0 158 70.3
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 7.2e-49 197.6 118 88.1
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 7.2e-49 197.6 161 70.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 9.4e-49 197.2 118 86.4
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.4e-49 197.2 161 70.2
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 9.4e-49 197.2 127 82.7
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 9.4e-49 197.2 158 71.5
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 9.4e-49 197.2 159 70.4
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.2e-48 196.8 153 73.2
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.2e-48 196.8 159 70.4
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.2e-48 196.8 159 70.4
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-48 196.8 118 87.3
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.6e-48 196.4 158 70.9
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 1.6e-48 196.4 117 87.2
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.6e-48 196.4 160 69.4
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.6e-48 196.4 117 84.6
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 2.1e-48 196.1 118 86.4
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 2.1e-48 196.1 159 69.8
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.1e-48 196.1 118 87.3
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.1e-48 196.1 118 84.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.1e-48 196.1 164 70.1
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.1e-48 196.1 118 84.7
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 2.1e-48 196.1 162 70.4
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.1e-48 196.1 118 86.4
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.6e-48 195.3 129 78.3
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 3.6e-48 195.3 117 86.3
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 3.6e-48 195.3 118 85.6
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 3.6e-48 195.3 116 86.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 3.6e-48 195.3 118 85.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 4.7e-48 194.9 117 86.3
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 4.7e-48 194.9 160 67.5
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 4.7e-48 194.9 117 86.3
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 4.7e-48 194.9 159 70.4
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 6.1e-48 194.5 160 69.4
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.1e-48 194.5 159 70.4
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 8.0e-48 194.1 159 69.2
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 8.0e-48 194.1 164 68.3
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 8.0e-48 194.1 118 83.1
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.4e-47 193.4 158 70.9
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.3e-47 192.6 116 85.3
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.8e-47 191.0 164 67.1
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.8e-47 191.0 164 67.1
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 3.4e-46 188.7 116 87.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 3.4e-46 188.7 159 67.3
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.4e-46 188.3 119 84.9
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 7.5e-46 187.6 164 67.1
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 7.5e-46 187.6 118 82.2
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 9.8e-46 187.2 117 81.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.8e-45 184.9 117 81.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 4.8e-45 184.9 118 82.2
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.1e-44 182.2 164 64.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 1.0e-42 177.2 117 76.1
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.7e-37 159.8 104 74.0
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.2e-37 159.5 118 69.5
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 4.1e-36 155.2 104 73.1
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.9e-35 151.4 136 65.4
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.7e-34 149.8 164 59.1
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.3e-34 149.4 103 76.7
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.6e-33 144.8 106 74.5
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 7.3e-33 144.4 132 66.7
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.6e-32 143.3 128 64.8
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 2.1e-32 142.9 140 60.0
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 3.6e-32 142.1 131 65.6
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 8.0e-32 141.0 111 71.2
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 8.0e-32 141.0 105 71.4
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.0e-31 140.6 90 78.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 1.0e-31 140.6 91 76.9
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.0e-31 140.6 131 63.4
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.7e-30 134.8 98 70.4
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.7e-26 123.2 114 61.4
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.3e-13 80.5 64 71.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.7e-13 79.0 110 41.8
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.4e-12 76.3 84 46.4
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 9.9e-06 54.3 107 36.4


User provided reference genes

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