Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 1.4e-134 483.0 252 100.0
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 6.6e-129 464.2 252 94.8
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.5e-128 463.0 252 95.2
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 2.5e-128 462.2 252 95.2
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 1.2e-127 459.9 252 94.0
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.2e-125 453.4 252 93.3
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.6e-125 452.2 252 92.1
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 7.5e-125 450.7 252 93.3
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 3.7e-124 448.4 250 93.6
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 7.1e-123 444.1 254 92.1
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 7.1e-123 444.1 250 92.4
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.6e-122 443.0 250 92.8
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.9e-120 436.0 260 88.8
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.8e-119 432.2 252 86.9
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 81.7
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 81.3
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 81.7
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 82.5
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 81.3
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 2.3e-113 412.5 250 80.0
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 1.5e-112 409.8 251 80.5
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 80.2
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 81.0
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 80.2
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 78.6
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 81.3
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 81.7
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 5.6e-112 407.9 252 80.6
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 5.6e-112 407.9 253 81.0
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 7.3e-112 407.5 252 79.8
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 9.6e-112 407.1 252 80.2
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 81.0
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 78.6
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 2.1e-111 406.0 252 79.8
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 80.2
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 80.6
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 79.0
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 80.2
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 80.6
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.4e-110 403.3 252 80.6
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.4e-110 402.5 252 78.6
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 79.8
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 79.8
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 79.8
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 6.9e-110 401.0 254 79.1
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 6.9e-110 401.0 252 79.8
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 6.9e-110 401.0 249 79.9
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 9.0e-110 400.6 250 78.0
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 9.0e-110 400.6 252 79.4
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 9.0e-110 400.6 252 79.4
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.2e-109 400.2 252 79.0
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.5e-109 399.8 252 80.2
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.5e-109 399.8 252 78.6
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.5e-109 399.8 252 79.8
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 2.6e-109 399.1 252 76.6
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 77.0
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 79.4
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 7.6e-109 397.5 252 78.6
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 77.8
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 79.4
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 77.8
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 2.2e-108 396.0 252 79.8
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 3.8e-108 395.2 250 79.2
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 3.8e-108 395.2 252 78.6
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 4.9e-108 394.8 252 79.8
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 6.4e-108 394.4 252 77.8
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 6.4e-108 394.4 252 77.4
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 6.4e-108 394.4 252 78.6
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 8.4e-108 394.0 252 78.2
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 1.1e-107 393.7 252 78.2
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.4e-107 393.3 254 76.8
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 1.9e-107 392.9 281 72.2
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.4e-107 392.5 260 76.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.4e-107 392.5 283 72.8
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 3.2e-107 392.1 252 77.8
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 7.1e-107 391.0 252 77.0
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 9.3e-107 390.6 252 79.0
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 9.3e-107 390.6 256 77.3
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.2e-106 390.2 253 77.9
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.6e-106 389.8 256 77.0
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 7.8e-106 387.5 252 78.2
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 3.0e-105 385.6 252 77.0
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.1e-104 383.6 252 77.0
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.5e-104 383.3 252 77.4
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.6e-103 379.8 253 74.7
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.1e-102 377.1 283 68.9
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 1.4e-102 376.7 252 75.8
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 2.6e-101 372.5 239 77.0
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 4.2e-99 365.2 256 72.3
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 2.7e-98 362.5 256 71.1
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 9.6e-96 354.0 252 71.8
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 2.8e-95 352.4 252 69.8
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.1e-94 350.5 252 69.8
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 9.0e-94 347.4 252 70.2
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.0e-93 346.3 272 68.4
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 1.1e-91 340.5 267 63.3
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.2e-90 337.0 221 76.5
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.3e-89 333.6 255 67.1
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 3.0e-89 332.4 252 69.4
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.6e-87 326.6 229 76.4
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 3.2e-83 312.4 252 64.7
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.2e-83 312.0 190 78.9
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 2.3e-81 306.2 191 80.6
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.8e-78 296.6 177 81.9
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 2.4e-78 296.2 177 83.1
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 5.9e-77 291.6 274 60.2
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 3.8e-76 288.9 176 79.5
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 5.1e-73 278.5 278 54.0
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 4.3e-72 275.4 255 56.5
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.2e-66 257.3 252 57.5
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.3e-63 247.3 254 53.1
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 4.5e-61 238.8 145 78.6
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.2e-58 230.7 254 48.4
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.4e-57 227.3 146 76.7
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 3.5e-45 186.0 123 74.0
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 3.6e-34 149.4 86 84.9
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 5.2e-33 145.6 96 70.8
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 2.2e-31 140.2 91 72.5
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.4e-22 110.9 83 67.5
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 4.1e-14 82.8 62 58.1
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 8.6e-12 75.1 49 71.4
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 1.6e-10 70.9 69 55.1
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 2.6e-08 63.5 34 79.4
Actinidia11341 Actinidia chinensis HOM05D006457 ORTHO05D056652 4.1e-06 56.2 38 71.1


User provided reference genes

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