Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 9.7e-118 426.8 209 100.0
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 4.4e-110 401.4 213 93.0
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.1e-108 395.2 213 92.5
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 2.9e-106 388.7 209 90.9
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.4e-105 386.3 213 89.2
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.2e-104 383.3 218 86.7
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.2e-104 383.3 218 86.7
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.2e-104 383.3 218 86.7
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.8e-103 379.4 217 86.2
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 3.9e-103 378.3 218 85.8
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 5.2e-103 377.9 218 85.8
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 5.2e-103 377.9 218 85.8
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 5.0e-98 361.3 211 83.4
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 9.7e-94 347.1 216 75.9
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 4.5e-75 285.0 218 64.7
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.9e-74 282.3 217 65.9
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.1e-73 280.4 211 64.0
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 5.6e-73 278.1 223 61.0
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 7.3e-73 277.7 223 61.0
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 9.5e-73 277.3 222 64.0
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 2.1e-72 276.2 170 74.7
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 3.6e-72 275.4 223 60.5
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 4.7e-72 275.0 216 61.1
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 5.2e-71 271.6 164 72.6
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 6.8e-71 271.2 216 61.6
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 2.6e-70 269.2 211 62.1
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 7.5e-70 267.7 207 63.3
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 7.5e-70 267.7 207 63.3
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 9.8e-70 267.3 208 62.0
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.7e-69 266.5 209 62.2
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 1.9e-68 263.1 194 64.4
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.9e-68 263.1 217 61.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 3.2e-68 262.3 195 62.6
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 7.0e-68 261.2 221 60.2
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 1.6e-67 260.0 169 68.6
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 2.0e-67 259.6 169 68.6
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 2.0e-67 259.6 168 72.0
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 4.6e-67 258.5 167 70.7
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 7.8e-67 257.7 172 69.8
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.0e-66 257.3 164 71.3
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.0e-66 257.3 215 60.0
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 1.3e-66 256.9 222 58.6
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 3.9e-66 255.4 214 58.4
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.5e-65 253.4 164 70.1
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.9e-65 253.1 214 58.4
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 4.3e-65 251.9 207 58.0
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 4.3e-65 251.9 220 58.6
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 4.3e-65 251.9 220 58.6
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.6e-64 250.0 178 65.7
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 3.6e-64 248.8 216 56.5
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 6.2e-64 248.1 218 58.7
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 6.2e-64 248.1 164 67.1
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 8.0e-64 247.7 164 67.1
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 1.1e-63 247.3 160 68.8
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 1.4e-63 246.9 180 62.8
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 1.4e-63 246.9 164 67.1
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.8e-63 246.5 163 71.8
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 3.1e-63 245.7 218 58.3
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 8.9e-63 244.2 211 55.0
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.5e-62 243.4 213 54.9
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 2.0e-62 243.0 172 64.0
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 2.0e-62 243.0 206 58.7
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 3.4e-62 242.3 166 69.3
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 7.5e-62 241.1 166 66.3
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.3e-61 240.4 164 64.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 2.9e-61 239.2 164 65.9
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 8.3e-61 237.7 216 57.9
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 2.4e-60 236.1 166 64.5
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.4e-60 236.1 164 62.8
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 2.4e-60 236.1 210 54.8
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 2.4e-60 236.1 174 64.4
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 5.4e-60 235.0 214 53.7
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 2.7e-59 232.6 214 52.8
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 6.0e-59 231.5 213 52.6
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 6.6e-58 228.0 209 55.0
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 8.6e-58 227.6 164 62.2
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 1.5e-57 226.9 211 55.5
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 2.8e-56 222.6 154 68.8
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 9.9e-54 214.2 172 58.7
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.9e-52 209.9 163 56.4
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.4e-52 209.5 309 40.8
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 4.1e-52 208.8 159 61.0
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.7e-50 203.4 174 58.0
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.7e-50 203.4 164 56.7
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 8.1e-48 194.5 125 68.0
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 1.2e-46 190.7 160 55.6
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.9e-44 183.3 166 54.2
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.1e-44 181.4 105 75.2
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.1e-43 179.9 105 75.2
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.6e-40 170.2 119 68.1
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 2.6e-38 162.9 110 65.5
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 3.8e-37 159.1 119 68.9
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.1e-36 157.5 163 47.9
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 3.5e-35 152.5 165 48.5
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 5.1e-34 148.7 216 43.1
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.8e-26 123.6 80 70.0
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 2.3e-26 123.2 92 62.0
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 8.4e-21 104.8 119 47.1
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 4.2e-20 102.4 146 45.2
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 6.0e-19 98.6 129 41.1
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 1.8e-18 97.1 131 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 1.1e-15 87.8 146 38.4
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 4.2e-12 75.9 41 73.2
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 9.3e-12 74.7 176 31.2


User provided reference genes

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