Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0087 Capsella rubella HOM05D008606 ORTHO05D114305 3.5e-55 218.0 108 100.0
Carub.0006s2899 Capsella rubella HOM05D008606 ORTHO05D014886 4.4e-21 104.8 119 47.1
Carub.0240s0002 Capsella rubella HOM05D008606 ORTHO05D014886 4.4e-21 104.8 119 47.1
Carub.0006s2897 Capsella rubella HOM05D008606 ORTHO05D014886 1.3e-20 103.2 119 47.9
CARHR112950 Cardamine hirsuta HOM05D008606 ORTHO05D014886 9.1e-19 97.1 118 44.9
Carub.0006s2903 Capsella rubella HOM05D008606 ORTHO05D014886 1.5e-18 96.3 120 43.3
Carub.0004s0095 Capsella rubella HOM05D008606 ORTHO05D014886 7.7e-18 94.0 119 45.4
Carub.0004s0094 Capsella rubella HOM05D008606 ORTHO05D014886 3.8e-17 91.7 119 43.7
Carub.0004s0103 Capsella rubella HOM05D008606 ORTHO05D014886 3.8e-17 91.7 116 44.8
CARHR040260 Cardamine hirsuta HOM05D008606 ORTHO05D011380 1.4e-16 89.7 119 42.0
CARHR041480 Cardamine hirsuta HOM05D008606 ORTHO05D011380 1.2e-15 86.7 119 40.3
AT2G21920 Arabidopsis thaliana HOM05D008606 ORTHO05D014886 3.6e-15 85.1 119 39.5
AT1G50220 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 3.9e-14 81.6 116 37.9
AL1G57810 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 5.2e-14 81.3 118 37.3
AT1G43171 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 6.7e-14 80.9 108 39.8
AT5G54067 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 1.5e-13 79.7 121 37.2
Carub.0008s1433 Capsella rubella HOM05D008606 ORTHO05D011380 1.5e-13 79.7 122 35.2
Carub.0004s0101 Capsella rubella HOM05D008606 ORTHO05D014886 2.6e-13 79.0 118 39.8
A06p03610 Brassica napus HOM05D008606 ORTHO05D011380 7.4e-13 77.4 114 36.0
Thhalv10000689m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.3e-12 76.6 130 34.6
A06p03350 Brassica napus HOM05D008606 ORTHO05D011380 1.7e-12 76.3 114 36.0
A06p08700 Brassica napus HOM05D008606 ORTHO05D011380 1.7e-12 76.3 114 36.0
BraA06t23543Z Brassica rapa HOM05D008606 ORTHO05D011380 1.7e-12 76.3 114 36.0
BraA06t23567Z Brassica rapa HOM05D008606 ORTHO05D011380 1.7e-12 76.3 114 36.0
BraA06t24067Z Brassica rapa HOM05D008606 ORTHO05D011380 1.7e-12 76.3 114 36.0
A09p20670 Brassica napus HOM05D008606 ORTHO05D011380 2.2e-12 75.9 114 35.1
BraA09t37671Z Brassica rapa HOM05D008606 ORTHO05D011380 2.2e-12 75.9 114 35.1
Thhalv10000541m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 3.7e-12 75.1 131 33.6
Thhalv10000608m.g Eutrema salsugineum HOM05D008606 ORTHO05D014886 1.4e-11 73.2 85 43.5
Thhalv10000528m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 4.1e-11 71.6 130 33.1
Thhalv10000711m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 2.6e-10 68.9 130 32.3
Carub.0006s2911 Capsella rubella HOM05D008606 ORTHO05D014886 3.5e-10 68.6 101 39.6
AL8G29180 Arabidopsis lyrata HOM05D008606 ORTHO05D011380 4.5e-10 68.2 87 40.2
A06p03580 Brassica napus HOM05D008606 ORTHO05D011380 1.0e-09 67.0 81 34.6
BcaB07g33665 Brassica carinata HOM05D008606 ORTHO05D011380 6.5e-09 64.3 113 35.4
BcaB04g20136 Brassica carinata HOM05D008606 ORTHO05D011380 1.1e-08 63.5 113 35.4
BcaC05g27441 Brassica carinata HOM05D008606 ORTHO05D011380 2.5e-08 62.4 105 34.3
C05p33960 Brassica napus HOM05D008606 ORTHO05D011380 2.5e-08 62.4 105 34.3
BolC5t32130H Brassica oleracea HOM05D008606 ORTHO05D011380 2.5e-08 62.4 105 34.3
BcaB07g33664 Brassica carinata HOM05D008606 ORTHO05D011380 4.2e-08 61.6 113 34.5
BcaNung04519 Brassica carinata HOM05D008606 ORTHO05D011380 5.5e-08 61.2 113 34.5
BcaNung04520 Brassica carinata HOM05D008606 ORTHO05D011380 7.2e-08 60.8 113 33.6
Thhalv10000701m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 7.2e-08 60.8 94 36.2
A05p20220 Brassica napus HOM05D008606 ORTHO05D011380 9.4e-08 60.5 105 33.3
BraA05t20932Z Brassica rapa HOM05D008606 ORTHO05D011380 9.4e-08 60.5 105 33.3
Carub.0006s2901 Capsella rubella HOM05D008606 ORTHO05D014886 2.1e-07 59.3 84 41.7
A05p17790 Brassica napus HOM05D010833 ORTHO05D013211 2.3e-06 55.8 90 36.7


User provided reference genes

Program Settings