Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 5.7e-36 153.7 75 100.0
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 2.7e-22 108.2 74 71.6
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.3e-19 99.4 74 63.5
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 2.8e-19 98.2 69 71.0
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 5.5e-15 84.0 77 57.1
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 6.1e-14 80.5 64 57.8
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 6.1e-14 80.5 64 57.8
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 5.2e-13 77.4 64 54.7
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 2.8e-11 71.6 77 49.4
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 2.8e-11 71.6 77 49.4
Carub.0004s1017 Capsella rubella HOM05D009342 ORTHO05D009997 4.8e-11 70.9 74 47.3
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 8.3e-11 70.1 76 48.7
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 8.3e-11 70.1 77 48.1
Carub.0004s1016 Capsella rubella HOM05D009342 ORTHO05D009997 1.1e-10 69.7 79 46.8
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 1.4e-10 69.3 73 46.6
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 1.8e-10 68.9 76 44.7
AT5G47175 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 2.4e-10 68.6 79 46.8
C02p48330 Brassica napus HOM05D009342 ORTHO05D012604 3.1e-10 68.2 76 52.6
BolC2t10865H Brassica oleracea HOM05D009342 ORTHO05D012604 3.1e-10 68.2 76 52.6
Carub.0008s0057 Capsella rubella HOM05D009342 ORTHO05D012604 7.0e-10 67.0 78 42.3
A02p30760 Brassica napus HOM05D009342 ORTHO05D012604 9.1e-10 66.6 76 51.3
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 9.1e-10 66.6 77 46.8
BraA02t08091Z Brassica rapa HOM05D009342 ORTHO05D012604 9.1e-10 66.6 76 51.3
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 9.1e-10 66.6 77 46.8
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 1.2e-09 66.2 73 43.8
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 1.6e-09 65.9 76 46.1
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 4.5e-09 64.3 76 44.7
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 4.5e-09 64.3 76 44.7
CARHR286760 Cardamine hirsuta HOM05D009342 ORTHO05D009997 2.2e-08 62.0 73 42.5
BcaC03g16932 Brassica carinata HOM05D009342 ORTHO05D012604 5.0e-08 60.8 62 48.4
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 1.5e-07 59.3 73 41.1
BcaC03g16931 Brassica carinata HOM05D009342 ORTHO05D012604 7.2e-07 57.0 61 52.5


User provided reference genes

Program Settings