Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s3607 Capsella rubella HOM05D000496 ORTHO05D011709 0.0e+00 1222.2 639 100.0
BcaC05g25783 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-12 78.6 105 37.1
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 2.6e-12 78.2 182 29.7
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 9.8e-12 76.3 184 28.3
BcaB08g36396 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 75.9 75 44.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-11 73.2 142 32.4
C08p23890 Brassica napus HOM05D000496 ORTHO05D000411 4.1e-10 70.9 76 42.1
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 69.3 156 31.4
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 69.3 177 26.6
BcaC07g42701 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 69.3 75 40.0
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-09 68.9 71 40.8
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-09 68.6 183 25.7
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-09 68.6 181 28.2
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-09 68.2 74 36.5
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-09 68.2 73 42.5
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 3.5e-09 67.8 182 30.2
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 4.6e-09 67.4 72 41.7
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-08 66.2 177 27.1
BcaB04g17991 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-08 65.9 75 37.3
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-08 65.5 109 28.4
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 3.0e-08 64.7 70 41.4
BcaC08g45870 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-08 64.3 172 30.8
BcaC02g10030 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-08 63.5 76 31.6
BcaC08g45061 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-08 63.5 105 30.5
BcaB07g33722 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-08 63.2 190 27.4
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-07 61.6 81 38.3
Thhalv10027079m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.5e-07 61.6 81 39.5
Thhalv10009587m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.3e-07 60.8 78 37.2
Thhalv10003487m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.6e-07 60.5 81 38.3
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.6e-07 60.5 80 36.2
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 7.3e-07 60.1 70 42.9
Thhalv10027498m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.5e-07 59.7 141 29.8
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-06 59.3 153 30.7
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-06 58.9 145 33.1
BcaC09g50348 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-06 58.9 169 28.4
BcaC04g23357 Brassica carinata HOM05D002074 ORTHO05D002164 2.8e-06 58.2 73 32.9
BcaC05g29417 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-06 58.2 74 29.7
Thhalv10005260m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.8e-06 58.2 102 32.4
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 3.6e-06 57.8 146 30.1
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.6e-06 57.8 97 30.9
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 4.7e-06 57.4 76 39.5
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-06 57.0 180 25.6
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.0e-06 56.6 168 26.2


User provided reference genes

Program Settings