Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 5.8e-92 340.9 173 100.0
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 2.3e-56 222.6 169 71.0
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 7.4e-55 217.6 172 69.8
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 5.3e-53 211.5 166 69.3
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 5.0e-51 204.9 174 67.2
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 8.4e-51 204.1 170 67.6
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.6e-49 199.9 175 67.4
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 4.6e-49 198.4 176 60.2
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 6.1e-49 198.0 175 65.1
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 6.1e-49 198.0 175 65.1
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 7.4e-47 191.0 174 62.1
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 4.3e-39 165.2 175 53.1
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 8.2e-38 161.0 175 51.4
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.4e-37 159.5 170 48.2
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 2.2e-35 152.9 174 49.4
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 7.2e-34 147.9 173 50.3
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 1.0e-32 144.1 172 50.6
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 1.4e-32 143.7 173 48.6
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 3.9e-32 142.1 162 46.9
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.5e-31 140.2 164 47.0
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 3.3e-31 139.0 164 47.0
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 7.4e-31 137.9 172 49.4
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 9.7e-31 137.5 168 46.4
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 1.3e-30 137.1 169 46.2
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 2.8e-30 136.0 170 45.9
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 4.8e-30 135.2 160 49.4
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 1.8e-29 133.3 154 49.4
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 3.1e-29 132.5 162 48.8
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 5.3e-29 131.7 166 49.4
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.2e-28 130.6 163 44.2
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 1.2e-28 130.6 169 43.8
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 2.6e-28 129.4 152 48.7
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 4.5e-28 128.6 157 46.5
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 5.9e-28 128.3 152 50.0
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 7.7e-28 127.9 165 47.3
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 1.7e-27 126.7 171 43.9
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 1.7e-27 126.7 151 47.7
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 3.8e-27 125.6 169 43.8
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 3.8e-27 125.6 154 46.1
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 1.1e-26 124.0 176 44.3
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.5e-26 123.6 156 46.8
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 7.2e-26 121.3 173 42.8
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 9.4e-26 120.9 163 44.8
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 1.2e-25 120.6 157 43.9
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 4.7e-25 118.6 165 44.8
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 1.4e-24 117.1 176 43.8
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 1.8e-24 116.7 166 43.4
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 4.0e-24 115.5 163 45.4
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.1e-23 114.0 154 44.2
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 1.1e-23 114.0 201 39.8
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 1.5e-23 113.6 163 44.2
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.5e-23 113.6 145 48.3
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 2.6e-23 112.8 154 41.6
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 4.4e-23 112.1 160 41.9
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 4.4e-23 112.1 159 42.8
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 7.5e-23 111.3 163 42.9
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 9.7e-23 110.9 182 41.8
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 1.3e-22 110.5 178 42.7
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 1.7e-22 110.2 165 41.8
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 2.2e-22 109.8 165 42.4
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 2.8e-22 109.4 170 39.4
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 2.8e-22 109.4 173 40.5
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 4.8e-22 108.6 174 40.2
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 1.4e-21 107.1 182 37.4
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 2.4e-21 106.3 160 42.5
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 7.0e-21 104.8 174 39.7
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 1.6e-20 103.6 157 39.5
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 2.0e-20 103.2 102 57.8
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 2.0e-20 103.2 153 40.5
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 2.6e-20 102.8 167 41.9
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 2.6e-20 102.8 165 41.2
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 2.6e-20 102.8 103 57.3
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 7.7e-20 101.3 162 38.9
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 1.3e-19 100.5 160 39.4
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 1.7e-19 100.1 171 39.2
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 1.7e-19 100.1 153 39.9
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 3.8e-19 99.0 175 35.4
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 3.8e-19 99.0 173 35.8
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 6.5e-19 98.2 103 55.3
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 6.5e-19 98.2 103 55.3
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 6.5e-19 98.2 170 41.2
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.9e-18 96.7 85 56.5
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.9e-18 96.7 172 36.0
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 4.2e-18 95.5 159 35.2
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 3.6e-17 92.4 147 36.1
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 4.7e-17 92.0 79 55.7
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 1.4e-16 90.5 157 38.2
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 1.8e-16 90.1 94 48.9
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 4.0e-16 89.0 83 53.0
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 8.8e-16 87.8 102 48.0
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 8.8e-16 87.8 93 47.3
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 1.2e-15 87.4 109 47.7
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 3.4e-15 85.9 130 40.0
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 4.4e-15 85.5 91 51.6
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 5.7e-15 85.1 168 37.5
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.3e-14 84.0 103 48.5
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 6.3e-14 81.6 76 52.6
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 8.3e-14 81.3 91 49.5
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 8.3e-14 81.3 103 44.7
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 9.1e-13 77.8 155 39.4
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 1.2e-12 77.4 91 46.2
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 2.7e-12 76.3 90 47.8
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.9e-11 72.8 97 42.3
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.9e-11 72.8 97 42.3
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 5.5e-10 68.6 87 42.5
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 3.0e-08 62.8 178 30.3
Pp3c6_3990 Physcomitrium patens HOM05D001298 ORTHO05D001110 1.7e-06 57.0 77 44.2
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 2.8e-06 56.2 63 44.4


User provided reference genes

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