Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s3102 Capsella rubella HOM05D009307 ORTHO05D011623 9.8e-36 154.8 78 100.0
Carub.0007s3104 Capsella rubella HOM05D009307 ORTHO05D011623 4.9e-35 152.5 78 98.7
AT5G35190 Arabidopsis thaliana HOM05D009307 ORTHO05D011623 9.2e-26 121.7 74 87.8
Carub.0004s1130 Capsella rubella HOM05D009307 ORTHO05D011623 4.7e-22 109.4 76 75.0
AL8G22520 Arabidopsis lyrata HOM05D009307 ORTHO05D011623 3.1e-21 106.7 76 75.0
CARHR180690 Cardamine hirsuta HOM05D009307 ORTHO05D011623 3.1e-21 106.7 72 77.8
BolC3t21173H Brassica oleracea HOM05D009307 ORTHO05D011623 3.3e-15 86.7 78 65.4
A01p19960 Brassica napus HOM05D009307 ORTHO05D011623 4.3e-15 86.3 78 65.4
BolC1t02456H Brassica oleracea HOM05D009307 ORTHO05D011623 4.3e-15 86.3 78 65.4
BolC3t21174H Brassica oleracea HOM05D009307 ORTHO05D011623 4.3e-15 86.3 78 65.4
BolC3t21175H Brassica oleracea HOM05D009307 ORTHO05D011623 4.3e-15 86.3 78 65.4
BraA01t01922Z Brassica rapa HOM05D009307 ORTHO05D011623 4.3e-15 86.3 78 65.4
Carub.0007s3106 Capsella rubella HOM05D009307 ORTHO05D011623 2.1e-14 84.0 69 72.5
BolC1t02458H Brassica oleracea HOM05D009307 ORTHO05D011623 3.6e-14 83.2 78 64.1
Carub.0007s3105 Capsella rubella HOM05D009307 ORTHO05D011623 2.3e-13 80.5 54 79.6
Carub.0006s0552 Capsella rubella HOM05D009307 ORTHO05D011623 2.2e-11 73.9 59 71.2
CARHR206570 Cardamine hirsuta HOM05D009307 ORTHO05D011623 5.4e-10 69.3 77 54.5
AT2G24980 Arabidopsis thaliana HOM05D009307 ORTHO05D011623 9.2e-10 68.6 70 58.6
AT5G06630 Arabidopsis thaliana HOM05D009307 ORTHO05D011623 1.2e-09 68.2 70 58.6
AL3G52210 Arabidopsis lyrata HOM05D009307 ORTHO05D011623 4.6e-09 66.2 58 63.8
AL6G16720 Arabidopsis lyrata HOM05D009307 ORTHO05D011623 1.0e-08 65.1 64 59.4
AT4G13390 Arabidopsis thaliana HOM05D009307 ORTHO05D011623 1.7e-08 64.3 79 55.7
AT4G08400 Arabidopsis thaliana HOM05D009307 ORTHO05D011623 2.5e-07 60.5 56 58.9
AT4G08410 Arabidopsis thaliana HOM05D009307 ORTHO05D011623 2.5e-07 60.5 56 58.9
AL7G42530 Arabidopsis lyrata HOM05D009307 ORTHO05D011623 4.7e-06 56.2 77 55.8


User provided reference genes

Program Settings