Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 5.2e-227 790.8 430 100.0
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.7e-199 698.7 431 88.4
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 5.7e-197 691.0 432 87.5
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 1.1e-195 686.8 428 87.9
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.0e-193 680.2 429 86.5
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.3e-188 663.3 433 86.4
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 6.5e-185 651.0 431 85.2
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 2.7e-175 619.0 430 82.6
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 1.8e-174 616.3 430 81.2
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 1.8e-174 616.3 430 81.2
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 1.5e-173 613.2 430 80.5
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 4.8e-172 608.2 436 78.2
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 1.2e-170 603.6 429 80.0
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 3.8e-169 598.6 429 80.2
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 3.8e-169 598.6 429 80.2
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 1.5e-168 596.7 430 78.8
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 9.7e-165 583.9 397 84.4
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 3.3e-152 542.3 432 70.8
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 6.0e-130 468.4 282 80.5
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 7.8e-130 468.0 280 80.7
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 3.9e-129 465.7 331 71.6
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 6.6e-129 464.9 311 76.2
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 8.6e-129 464.5 298 77.5
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 5.6e-128 461.8 305 75.7
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 9.5e-128 461.1 297 75.1
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 2.8e-127 459.5 301 75.7
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 6.2e-127 458.4 307 74.9
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 6.2e-127 458.4 299 75.9
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 6.2e-127 458.4 296 75.7
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 8.1e-127 458.0 310 75.2
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 8.1e-127 458.0 303 73.9
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 8.1e-127 458.0 299 75.9
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 1.4e-126 457.2 325 72.0
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 3.1e-126 456.1 322 72.4
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 6.8e-126 454.9 302 74.2
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 1.2e-125 454.1 304 73.4
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 1.2e-125 454.1 341 69.2
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 1.2e-125 454.1 320 72.2
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 3.4e-125 452.6 280 77.5
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 5.8e-125 451.8 308 74.0
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 5.8e-125 451.8 315 72.1
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 5.8e-125 451.8 336 69.0
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 2.2e-124 449.9 368 65.8
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 2.9e-124 449.5 355 67.6
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 3.7e-124 449.1 301 73.4
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 6.4e-124 448.4 314 72.3
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 8.3e-124 448.0 393 60.6
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 8.3e-124 448.0 376 65.4
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 1.9e-123 446.8 369 64.2
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 2.4e-123 446.4 396 61.9
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 2.4e-123 446.4 396 61.9
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 3.2e-123 446.0 301 73.1
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 3.2e-123 446.0 318 70.4
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 3.2e-123 446.0 303 72.9
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 4.1e-123 445.7 370 64.3
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 4.1e-123 445.7 302 73.2
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 5.4e-123 445.3 316 71.5
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 9.2e-123 444.5 386 63.7
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 1.2e-122 444.1 303 72.6
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 2.1e-122 443.4 280 75.7
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 2.7e-122 443.0 401 61.3
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 4.6e-122 442.2 344 66.3
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 4.6e-122 442.2 331 68.6
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 6.0e-122 441.8 280 75.4
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 6.0e-122 441.8 281 75.4
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 6.0e-122 441.8 313 70.9
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 6.0e-122 441.8 311 72.0
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 7.8e-122 441.4 371 63.9
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 1.7e-121 440.3 314 71.3
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 3.9e-121 439.1 303 72.9
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 3.9e-121 439.1 397 59.7
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 5.1e-121 438.7 282 76.2
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 5.1e-121 438.7 300 73.0
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 6.6e-121 438.3 399 61.7
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 6.6e-121 438.3 315 70.5
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 8.6e-121 438.0 399 61.4
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 8.6e-121 438.0 397 61.0
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 1.5e-120 437.2 372 63.7
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.9e-120 436.8 344 66.3
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 2.5e-120 436.4 351 65.2
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 2.5e-120 436.4 407 60.9
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 5.6e-120 435.3 311 69.8
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.6e-119 433.7 316 69.6
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 1.6e-119 433.7 276 75.0
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 2.1e-119 433.3 396 61.9
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 2.8e-119 433.0 317 68.8
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 3.6e-119 432.6 334 66.5
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.6e-119 432.6 332 67.2
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.6e-119 432.6 334 66.5
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 8.1e-119 431.4 273 73.6
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 8.1e-119 431.4 311 68.8
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.4e-118 430.6 311 68.8
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 1.8e-118 430.3 303 71.3
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 3.1e-118 429.5 399 60.9
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 3.1e-118 429.5 315 69.5
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 4.0e-118 429.1 315 69.8
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 5.2e-118 428.7 399 61.4
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 5.2e-118 428.7 399 61.4
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 2.0e-117 426.8 395 60.5
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.6e-117 426.4 356 62.9
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 2.6e-117 426.4 381 61.9
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 3.4e-117 426.0 372 61.8
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 5.8e-117 425.2 365 63.6
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 5.8e-117 425.2 399 61.2
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 5.8e-117 425.2 276 74.6
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 7.6e-117 424.9 395 60.3
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 1.3e-116 424.1 359 63.2
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 1.3e-116 424.1 373 61.7
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 2.2e-116 423.3 302 70.2
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 3.8e-116 422.5 368 63.0
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 4.9e-116 422.2 399 59.6
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 4.9e-116 422.2 370 63.2
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 5.4e-115 418.7 260 78.5
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 1.2e-114 417.5 356 60.7
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.6e-114 417.2 326 67.8
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 2.1e-114 416.8 304 70.1
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 2.1e-114 416.8 364 60.2
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 6.6e-113 411.8 373 59.5
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.1e-110 402.9 316 66.1
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 7.8e-106 388.3 410 54.9
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 3.0e-105 386.3 373 57.1
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 5.6e-104 382.1 273 72.5
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 1.4e-102 377.5 309 64.7
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 7.1e-99 365.2 276 64.1
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 1.8e-97 360.5 262 69.5
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 1.8e-97 360.5 213 80.3
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 4.5e-93 345.9 283 65.4
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 4.0e-86 322.8 206 78.2
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.2e-84 317.0 190 82.1
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 5.5e-83 312.4 284 54.6
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 4.3e-80 302.8 271 54.6
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 1.8e-78 297.4 327 54.4
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 4.2e-75 286.2 218 66.5
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.8e-73 280.8 450 41.1
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.7e-71 273.1 234 63.7
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.7e-71 273.1 234 63.7
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 3.4e-69 266.5 255 51.0
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 3.0e-65 253.4 225 61.8
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 3.0e-57 226.9 188 63.8
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 3.0e-57 226.9 255 60.8
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 3.0e-57 226.9 180 62.2
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 5.2e-57 226.1 180 62.8
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 4.4e-56 223.0 180 62.2
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.2e-55 220.7 232 55.2
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 6.3e-55 219.2 136 75.7
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 4.5e-53 213.0 162 68.5
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 1.8e-38 164.5 155 56.1
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 5.4e-38 162.9 180 48.9
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 1.0e-36 158.7 149 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 5.0e-36 156.4 157 49.7
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 7.2e-35 152.5 190 60.0
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 6.8e-33 146.0 131 58.8
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.0e-28 132.1 72 80.6
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 2.3e-28 131.0 78 75.6
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 2.5e-27 127.5 75 77.3
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 2.5e-27 127.5 114 50.0
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 4.4e-24 116.7 62 80.6
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 1.7e-23 114.8 97 58.8
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 6.0e-21 106.3 101 49.5
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 8.1e-18 95.9 141 39.0
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 1.4e-17 95.1 53 83.0
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 3.1e-17 94.0 104 50.0
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 8.3e-15 85.9 62 61.3
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 1.1e-14 85.5 59 71.2
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 2.4e-14 84.3 54 72.2
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.6e-13 81.6 55 74.5
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 3.9e-12 77.0 53 66.0


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