Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 2.2e-117 425.6 218 100.0
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 7.8e-102 374.0 218 89.0
Thhalv10026210m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 2.0e-89 332.8 220 80.9
AL7G34790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 2.7e-86 322.4 219 79.0
BcaC09g51418 Brassica carinata HOM05D005907 ORTHO05D007033 8.9e-82 307.4 218 73.4
C01p13330 Brassica napus HOM05D005907 ORTHO05D007033 8.9e-82 307.4 218 73.4
BolC1t01308H Brassica oleracea HOM05D005907 ORTHO05D007033 8.9e-82 307.4 218 73.4
A01p11320 Brassica napus HOM05D005907 ORTHO05D007033 1.7e-80 303.1 218 72.5
BraA01t01076Z Brassica rapa HOM05D005907 ORTHO05D007033 1.7e-80 303.1 218 72.5
Sp4g03880 Schrenkiella parvula HOM05D005907 ORTHO05D007033 6.4e-80 301.2 189 81.5
CARHR226160 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.4e-79 299.3 220 73.6
Sp7g17980 Schrenkiella parvula HOM05D005907 ORTHO05D007033 3.4e-73 278.9 165 83.0
BcaNung01784 Brassica carinata HOM05D005907 ORTHO05D007033 1.6e-70 270.0 219 66.7
Aa31LG6G1970 Aethionema arabicum HOM05D005907 ORTHO05D007033 6.6e-69 264.6 226 64.2
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 8.1e-59 231.1 217 58.5
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 2.6e-33 146.4 165 46.1
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 1.0e-32 144.4 160 46.2
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.2e-32 143.3 164 46.3
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 2.2e-32 143.3 164 43.9
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 6.5e-32 141.7 164 43.3
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 6.5e-32 141.7 149 45.0
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 1.4e-31 140.6 164 44.5
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 1.4e-31 140.6 164 44.5
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 1.9e-31 140.2 164 45.1
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 3.2e-31 139.4 173 42.2
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 7.2e-31 138.3 164 43.9
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 9.4e-31 137.9 158 43.7
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 9.4e-31 137.9 160 43.8
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 9.4e-31 137.9 160 43.8
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 1.6e-30 137.1 163 45.4
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 2.1e-30 136.7 169 43.2
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 2.1e-30 136.7 170 42.4
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 2.1e-30 136.7 164 43.3
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 2.1e-30 136.7 160 43.1
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 2.1e-30 136.7 150 46.0
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 2.7e-30 136.3 168 42.9
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 4.6e-30 135.6 180 40.6
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 4.6e-30 135.6 161 44.1
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 6.1e-30 135.2 149 43.0
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 6.1e-30 135.2 155 45.2
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 7.9e-30 134.8 167 44.3
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 1.0e-29 134.4 174 41.4
Carub.0001s3002 Capsella rubella HOM05D005907 ORTHO05D007033 1.8e-29 133.7 156 46.2
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 1.8e-29 133.7 164 42.1
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 2.3e-29 133.3 190 40.0
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 3.0e-29 132.9 154 45.5
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 3.0e-29 132.9 152 44.7
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 3.9e-29 132.5 164 44.5
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 5.1e-29 132.1 171 42.1
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 1.1e-28 131.0 155 45.8
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 1.1e-28 131.0 163 44.2
Aa31LG2G14390 Aethionema arabicum HOM05D005907 ORTHO05D007033 1.5e-28 130.6 174 43.7
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 1.5e-28 130.6 154 43.5
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 2.0e-28 130.2 164 42.1
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 2.0e-28 130.2 164 42.1
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 2.6e-28 129.8 162 42.0
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 2.6e-28 129.8 177 38.4
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 3.3e-28 129.4 155 44.5
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 3.3e-28 129.4 161 42.2
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 3.3e-28 129.4 169 43.2
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 4.4e-28 129.0 164 39.6
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 4.4e-28 129.0 164 39.6
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 4.4e-28 129.0 152 41.4
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 7.4e-28 128.3 158 44.9
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 9.7e-28 127.9 162 40.1
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 1.3e-27 127.5 166 41.0
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 1.7e-27 127.1 156 41.7
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 1.7e-27 127.1 156 41.0
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 2.2e-27 126.7 156 44.2
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 2.8e-27 126.3 149 40.9
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 2.8e-27 126.3 169 43.8
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 2.8e-27 126.3 164 44.5
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 2.8e-27 126.3 173 42.8
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 4.8e-27 125.6 161 38.5
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 4.8e-27 125.6 162 40.1
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 8.2e-27 124.8 155 43.2
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 1.4e-26 124.0 151 45.0
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 1.8e-26 123.6 194 38.7
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 3.1e-26 122.9 171 39.2
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 4.1e-26 122.5 155 41.3
AT1G31720 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 5.3e-26 122.1 164 43.3
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 5.3e-26 122.1 157 39.5
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 5.3e-26 122.1 168 37.5
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 5.3e-26 122.1 165 40.0
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 6.9e-26 121.7 156 42.9
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 9.1e-26 121.3 168 36.9
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 1.2e-25 120.9 166 38.6
VMungo0251G3198 Vigna mungo HOM05D005907 ORTHO05D007033 1.2e-25 120.9 169 41.4
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 1.5e-25 120.6 162 40.7
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 2.0e-25 120.2 164 39.6
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 4.5e-25 119.0 164 42.7
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 4.5e-25 119.0 164 39.0
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 5.9e-25 118.6 169 43.2
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 1.0e-24 117.9 157 38.2
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 1.3e-24 117.5 154 39.6
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.7e-24 117.1 160 38.8
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.9e-24 116.3 166 43.4
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 2.9e-24 116.3 152 42.8
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 5.0e-24 115.5 161 39.1
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 8.5e-24 114.8 160 38.1
Cpa.g.c30909 Carica papaya HOM05D005907 ORTHO05D007033 1.4e-23 114.0 128 45.3
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 1.9e-23 113.6 163 38.0
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 3.2e-23 112.8 147 45.6
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 7.2e-23 111.7 144 42.4
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 7.2e-23 111.7 154 39.6
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 4.7e-22 109.0 162 38.9
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 1.4e-21 107.5 137 43.1
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 8.8e-21 104.8 159 38.4
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.5e-20 104.0 169 36.7
CDE01G0013 Ceratophyllum demersum HOM05D005907 ORTHO05D007033 6.3e-19 98.6 154 37.0
Haze_08421 Corylus avellana HOM05D005907 ORTHO05D007033 1.7e-16 90.5 93 48.4
Os02g0703300 Oryza sativa ssp. japonica HOM05D005907 ORTHO05D007033 5.0e-16 89.0 135 34.1
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 5.0e-16 89.0 117 41.9
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 6.5e-16 88.6 129 38.0
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 4.2e-15 85.9 113 38.1
SEGI_02785 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 4.7e-14 82.4 136 37.5
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 8.0e-14 81.6 115 36.5
Peaxi162Scf00550g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 1.0e-13 81.3 101 41.6
SEGI_15207 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 2.3e-13 80.1 142 31.7
Zm00001eb251950 Zea mays HOM05D005907 ORTHO05D007033 4.0e-13 79.3 137 35.8
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 5.2e-13 79.0 158 33.5
DCAR_014571 Daucus carota HOM05D002819 ORTHO05D003207 8.2e-11 71.6 154 33.8
ClCG11G016120 Citrullus lanatus HOM05D005907 ORTHO05D007033 1.1e-10 71.2 96 39.6
SGA_v2.0_scaffold50G18432 Striga asiatica HOM05D002819 ORTHO05D003207 1.1e-10 71.2 141 33.3
Actinidia18697 Actinidia chinensis HOM05D002819 ORTHO05D003207 1.8e-10 70.5 151 33.8
CiPaw.06G020000 Carya illinoinensis HOM05D002819 ORTHO05D003207 2.4e-10 70.1 138 34.1
Nitab4.5_0000021g0320 Nicotiana tabacum HOM05D002819 ORTHO05D003207 2.4e-10 70.1 151 33.8
CSS0046349 Camellia sinensis var. sinensis HOM05D002819 ORTHO05D003207 5.3e-10 68.9 142 33.8
Cc02_g00430 Coffea canephora HOM05D002819 ORTHO05D003207 1.2e-09 67.8 151 33.1
Eucgr.K00098 Eucalyptus grandis HOM05D002819 ORTHO05D003207 2.7e-09 66.6 153 33.3
Aqoxy2G03476 Aquilegia oxysepala HOM05D005907 ORTHO05D007033 3.5e-09 66.2 96 37.5
EL10Ac3g05101 Beta vulgaris HOM05D002819 ORTHO05D003207 3.5e-09 66.2 162 34.0
Eucgr.L02108 Eucalyptus grandis HOM05D002819 ORTHO05D003207 3.5e-09 66.2 153 33.3
arahy.Tifrunner.gnm1.ann1.UI3LS8 Arachis hypogaea HOM05D005907 ORTHO05D007033 4.5e-09 65.9 100 37.0
AUR62028148 Chenopodium quinoa HOM05D002819 ORTHO05D003207 2.9e-08 63.2 154 30.5
unitig_578.g16665 Utricularia gibba HOM05D002819 ORTHO05D003207 2.9e-08 63.2 152 29.6
AL6G28260 Arabidopsis lyrata HOM05D002819 ORTHO05D003207 3.8e-08 62.8 146 28.8
DCAR_010549 Daucus carota HOM05D002819 ORTHO05D003207 3.8e-08 62.8 156 31.4
Aqoxy3G02055 Aquilegia oxysepala HOM05D002819 ORTHO05D003207 5.0e-08 62.4 153 28.8
Eucgr.K00096 Eucalyptus grandis HOM05D002819 ORTHO05D003207 5.0e-08 62.4 156 31.4
Actinidia08734 Actinidia chinensis HOM05D002819 ORTHO05D003207 6.5e-08 62.0 147 32.7
Gohir.A08G223480 Gossypium hirsutum HOM05D002819 ORTHO05D003207 6.5e-08 62.0 152 28.3
SEGI_10725 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 8.5e-08 61.6 153 31.4
Sc19g0000260 Simmondsia chinensis HOM05D002819 ORTHO05D003207 1.1e-07 61.2 144 31.2
CARHR196000 Cardamine hirsuta HOM05D002819 ORTHO05D003207 1.5e-07 60.8 143 28.7
MELO3C016217.2 Cucumis melo HOM05D005907 ORTHO05D007033 1.5e-07 60.8 56 50.0
SEGI_36138 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.5e-07 60.8 146 30.8
CsaV3_4G004490 Cucumis sativus L. HOM05D002819 ORTHO05D003207 3.2e-07 59.7 159 28.3
FvH4_7g33561 Fragaria vesca HOM05D002819 ORTHO05D003207 3.2e-07 59.7 146 29.5
Eucgr.G01794 Eucalyptus grandis HOM05D002819 ORTHO05D003207 5.5e-07 58.9 150 30.0
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 5.5e-07 58.9 69 37.7
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea HOM05D005907 ORTHO05D007033 7.2e-07 58.5 56 48.2
Carub.0006s1540 Capsella rubella HOM05D002819 ORTHO05D003207 7.2e-07 58.5 148 27.0
HanXRQChr15g0491051 Helianthus annuus HOM05D002819 ORTHO05D003207 7.2e-07 58.5 142 30.3
FAN01G0524 Fragaria x ananassa HOM05D000526 ORTHO05D000956 9.4e-07 58.2 139 30.2
AT5G17210 Arabidopsis thaliana HOM05D002819 ORTHO05D003207 1.6e-06 57.4 146 27.4
FAN10G2719 Fragaria x ananassa HOM05D000526 ORTHO05D000956 1.6e-06 57.4 179 27.4
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 3.6e-06 56.2 60 41.7
Lsat_1_v5_gn_6_17141 Lactuca sativa HOM05D005907 ORTHO05D007033 3.6e-06 56.2 77 37.7
BcaC04g18822 Brassica carinata HOM05D002819 ORTHO05D003207 4.7e-06 55.8 148 29.7


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