Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 8.8e-81 303.5 149 100.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.1e-66 254.2 152 84.9
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.8e-65 252.7 155 83.9
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-64 250.0 152 83.6
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.2e-64 250.0 155 85.2
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 3.4e-64 248.4 155 84.5
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 4.4e-64 248.1 153 83.0
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 4.4e-64 248.1 153 83.0
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.7e-63 246.1 153 82.4
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 6.3e-63 244.2 153 83.0
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 6.3e-63 244.2 152 82.2
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 4.1e-62 241.5 153 81.7
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-61 240.0 153 82.4
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.6e-61 239.6 153 81.7
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.6e-61 239.6 153 80.4
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 7.8e-61 237.3 156 79.5
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 7.8e-61 237.3 156 79.5
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 5.6e-51 204.5 149 71.1
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 9.5e-51 203.8 108 95.4
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 8.6e-44 180.6 150 64.7
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 8.9e-41 170.6 143 63.6
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.2e-40 170.2 143 63.6
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 3.7e-39 165.2 146 58.2
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 4.9e-39 164.9 143 62.2
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 8.3e-39 164.1 146 58.2
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 2.4e-38 162.5 143 61.5
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 4.1e-38 161.8 146 57.5
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 5.4e-38 161.4 141 60.3
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 1.2e-37 160.2 134 61.9
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.1e-37 159.5 128 64.8
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.1e-37 159.5 148 61.5
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 2.7e-37 159.1 143 58.7
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 7.8e-37 157.5 143 58.7
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 7.8e-37 157.5 107 73.8
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 7.8e-37 157.5 102 75.5
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 7.8e-37 157.5 142 59.2
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.0e-36 157.1 119 68.9
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.0e-36 157.1 97 79.4
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 1.0e-36 157.1 126 62.7
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.0e-36 157.1 145 57.2
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.7e-36 156.4 144 61.1
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.7e-36 156.4 141 59.6
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 2.3e-36 156.0 143 58.7
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 2.3e-36 156.0 105 72.4
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 3.0e-36 155.6 102 75.5
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.0e-36 155.6 107 72.0
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 3.0e-36 155.6 143 55.9
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 3.0e-36 155.6 139 59.7
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 3.9e-36 155.2 125 60.8
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 5.1e-36 154.8 98 76.5
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 5.1e-36 154.8 148 60.1
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 5.1e-36 154.8 144 58.3
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 6.6e-36 154.5 97 79.4
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.6e-36 154.5 151 56.3
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 8.6e-36 154.1 113 69.9
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.1e-35 153.7 104 74.0
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.1e-35 153.7 99 72.7
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.5e-35 153.3 99 72.7
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.9e-35 152.9 107 70.1
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.9e-35 152.9 115 66.1
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 2.5e-35 152.5 107 70.1
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 2.5e-35 152.5 93 79.6
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.5e-35 152.5 136 60.3
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 3.3e-35 152.1 100 74.0
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 4.3e-35 151.8 138 60.1
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 4.3e-35 151.8 105 72.4
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 4.3e-35 151.8 83 84.3
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 4.3e-35 151.8 141 58.9
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 5.6e-35 151.4 153 54.9
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 7.3e-35 151.0 82 85.4
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 9.5e-35 150.6 83 83.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.2e-34 150.2 141 58.2
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.8e-34 149.1 109 68.8
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.6e-34 148.7 91 74.7
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.6e-34 148.7 91 74.7
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.1e-33 147.1 109 68.8
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.8e-33 146.4 153 52.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.4e-33 146.0 116 62.9
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 3.1e-33 145.6 103 68.9
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.1e-33 145.6 115 66.1
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 4.0e-33 145.2 91 71.4
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 4.0e-33 145.2 81 81.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 5.2e-33 144.8 99 70.7
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 6.8e-33 144.4 91 71.4
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.5e-32 143.3 146 57.5
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 2.0e-32 142.9 83 80.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.0e-32 142.9 82 80.5
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 2.6e-32 142.5 115 65.2
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 7.6e-32 141.0 91 74.7
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 2.9e-31 139.0 108 67.6
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 5.4e-30 134.8 99 73.7
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.2e-29 133.7 77 83.1
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.7e-28 129.8 71 81.7
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.6e-26 123.2 80 71.2
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.8e-26 122.5 140 50.7
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 4.7e-26 121.7 102 58.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.4e-25 120.2 68 77.9
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 3.1e-25 119.0 101 61.4
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 5.8e-24 114.8 122 55.7
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 2.9e-23 112.5 75 72.0
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.1e-22 110.5 102 57.8
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 4.6e-21 105.1 122 51.6
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 4.6e-21 105.1 79 63.3
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.3e-19 97.8 56 82.1
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 3.8e-15 85.5 67 70.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 7.1e-14 81.3 65 64.6


User provided reference genes

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