Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 5.3e-193 677.6 350 100.0
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 2.4e-177 625.5 350 92.9
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 1.2e-173 613.2 350 91.7
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 2.4e-169 599.0 353 89.5
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.4e-164 583.2 350 86.6
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 5.3e-161 571.2 353 85.3
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 3.0e-156 555.4 348 82.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 6.5e-151 537.7 353 81.0
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 2.5e-150 535.8 353 78.2
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 9.4e-150 533.9 352 80.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 1.5e-147 526.6 353 79.9
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 4.4e-147 525.0 352 79.0
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.1e-145 520.4 355 79.2
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 1.0e-140 503.8 334 80.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.5e-139 500.0 352 77.8
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 3.1e-137 492.3 350 77.4
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.8e-132 476.5 334 77.8
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.0e-131 473.0 376 70.2
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.6e-120 436.8 286 78.0
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.7e-120 436.0 306 73.9
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.1e-108 397.5 294 70.4
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 2.6e-107 392.9 359 60.4
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 9.2e-105 384.4 283 69.3
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 9.2e-105 384.4 270 69.6
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.7e-104 382.9 279 69.2
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 3.5e-104 382.5 301 64.8
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 7.8e-104 381.3 277 70.8
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 7.8e-104 381.3 267 70.4
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.0e-103 380.9 277 70.8
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 2.3e-103 379.8 279 70.3
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 3.9e-103 379.0 339 61.1
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 3.9e-103 379.0 359 59.3
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 3.9e-103 379.0 274 69.7
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.9e-102 376.7 351 58.4
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.9e-102 376.7 354 58.5
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 2.5e-102 376.3 287 65.9
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 4.3e-102 375.6 286 67.5
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.6e-101 372.5 287 64.8
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 1.2e-99 367.5 286 66.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.5e-99 367.1 337 57.6
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 3.8e-98 362.5 364 53.6
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 4.9e-98 362.1 281 65.8
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.9e-97 360.1 273 65.6
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 3.2e-97 359.4 256 69.1
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.0e-95 352.8 286 63.6
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.6e-95 351.7 286 63.6
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 8.7e-95 351.3 286 64.0
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.1e-94 350.9 286 62.2
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.5e-94 350.5 269 66.2
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.9e-94 350.1 286 63.6
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 2.5e-94 349.7 287 61.7
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.6e-93 347.1 345 54.8
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.8e-93 346.3 355 55.8
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 8.1e-93 344.7 266 65.8
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.4e-92 343.2 345 54.2
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 6.9e-92 341.7 256 64.8
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.6e-91 339.7 280 60.7
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 4.4e-91 339.0 271 62.4
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 4.4e-91 339.0 302 59.3
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 5.8e-91 338.6 356 52.2
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.3e-90 337.4 286 57.3
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.3e-90 337.4 356 52.8
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.9e-90 335.5 315 56.5
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 8.4e-90 334.7 255 64.7
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.1e-89 334.3 298 59.1
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.4e-89 334.0 265 60.4
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 5.4e-89 332.0 280 61.8
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 7.1e-89 331.6 269 62.8
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-88 330.9 329 53.8
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.0e-87 327.8 294 59.2
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.3e-87 327.4 293 57.7
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 3.9e-87 325.9 285 58.9
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 6.6e-87 325.1 316 54.4
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.5e-86 323.9 272 59.2
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 3.3e-86 322.8 268 60.4
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 8.1e-85 318.2 266 60.5
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 8.1e-85 318.2 330 53.0
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.4e-84 317.4 264 61.7
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.8e-84 317.0 326 49.7
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.4e-84 316.6 334 53.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 9.0e-84 314.7 270 57.0
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.2e-83 314.3 268 59.7
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 2.2e-82 310.1 308 52.6
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 2.2e-82 310.1 269 58.0
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 1.1e-81 307.8 269 57.6
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 3.2e-81 306.2 357 49.3
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.2e-80 304.3 329 50.5
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 2.1e-80 303.5 297 54.2
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 2.7e-80 303.1 299 52.5
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 4.6e-80 302.4 284 56.0
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 4.6e-80 302.4 350 47.7
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 7.9e-80 301.6 261 57.1
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 3.9e-79 299.3 266 56.4
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 3.9e-79 299.3 362 47.2
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.1e-78 297.7 297 53.2
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.5e-78 297.4 339 48.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 5.6e-78 295.4 280 55.0
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 4.5e-75 285.8 289 48.4
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.2e-72 277.7 234 59.0
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.7e-72 276.6 231 60.2
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.5e-70 270.8 274 53.3
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.9e-70 270.4 205 62.0
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 9.3e-65 251.5 220 55.9
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.4e-57 227.6 230 51.3
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 4.7e-48 196.1 147 66.7
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 2.0e-46 190.7 162 58.0
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 4.1e-36 156.4 137 59.1
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.0e-30 137.5 360 30.8
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 9.8e-22 108.6 197 37.6
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 3.7e-21 106.7 261 29.1
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.5e-17 94.7 74 64.9
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 1.1e-09 68.6 88 47.7
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.3e-07 60.8 93 45.2
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 8.9e-07 58.9 74 44.6
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 8.9e-07 58.9 72 43.1


User provided reference genes

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