Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s1232 Capsella rubella HOM05D015040 ORTHO05D016588 5.8e-61 237.3 112 100.0
AT4G28397 Arabidopsis thaliana HOM05D015040 ORTHO05D016588 3.9e-41 171.4 110 70.9
AL7G24180 Arabidopsis lyrata HOM05D015040 ORTHO05D016588 1.6e-34 149.4 94 69.1
C01p24900 Brassica napus HOM05D015040 ORTHO05D016588 7.9e-34 147.1 109 64.2
BolC1t02435H Brassica oleracea HOM05D015040 ORTHO05D016588 7.9e-34 147.1 109 64.2
A01p19810 Brassica napus HOM05D015040 ORTHO05D016588 3.0e-33 145.2 109 62.4
Sp7g26365 Schrenkiella parvula HOM05D015040 ORTHO05D016588 3.9e-33 144.8 111 64.9
Thhalv10026605m.g Eutrema salsugineum HOM05D015040 ORTHO05D016588 8.8e-33 143.7 111 67.6
CARHR236160 Cardamine hirsuta HOM05D015040 ORTHO05D016588 3.1e-30 135.2 111 61.3
BcaC09g50481 Brassica carinata HOM05D015040 ORTHO05D016588 1.6e-18 96.3 77 59.7
BraA01t01912Z Brassica rapa HOM05D000223 ORTHO05D023898 1.3e-15 86.7 59 67.8
Carub.0007s1234 Capsella rubella HOM05D007676 ORTHO05D009456 1.9e-11 72.8 91 42.9
C07p56160 Brassica napus HOM05D000223 ORTHO05D000736 1.6e-10 69.7 92 39.1
Sp7g26360 Schrenkiella parvula HOM05D007676 ORTHO05D009456 1.6e-10 69.7 95 45.3
BolC7t46093H Brassica oleracea HOM05D007676 ORTHO05D009456 4.7e-10 68.2 92 39.1
A03p58040 Brassica napus HOM05D000223 ORTHO05D000736 1.0e-09 67.0 92 38.0
BraA03t14868Z Brassica rapa HOM05D007676 ORTHO05D009456 1.0e-09 67.0 92 38.0
Thhalv10026526m.g Eutrema salsugineum HOM05D007676 ORTHO05D009456 1.0e-09 67.0 91 42.9
BcaC06g32625 Brassica carinata HOM05D007676 ORTHO05D009456 1.4e-09 66.6 92 38.0
CARHR236150 Cardamine hirsuta HOM05D007676 ORTHO05D009456 2.2e-07 59.3 93 39.8
AL7G24190 Arabidopsis lyrata HOM05D007676 ORTHO05D009456 1.4e-06 56.6 93 35.5
Carub.0007s1233 Capsella rubella HOM05D007676 ORTHO05D009456 5.4e-06 54.7 95 33.7


User provided reference genes

Program Settings