Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s1103 Capsella rubella HOM05D004932 ORTHO05D005622 4.0e-160 568.2 308 100.0
AT4G29520 Arabidopsis thaliana HOM05D004932 ORTHO05D005622 1.2e-145 520.0 308 92.5
AL7G22880 Arabidopsis lyrata HOM05D004932 ORTHO05D005622 1.4e-144 516.5 309 92.9
A01p08520 Brassica napus HOM05D004932 ORTHO05D005622 2.7e-132 475.7 314 82.2
Thhalv10025804m.g Eutrema salsugineum HOM05D004932 ORTHO05D005622 2.3e-131 472.6 310 81.3
BcaC09g51740 Brassica carinata HOM05D004932 ORTHO05D005622 2.5e-130 469.2 311 84.9
Sp7g27380 Schrenkiella parvula HOM05D004932 ORTHO05D005622 1.1e-128 463.8 313 84.3
BraA01t00801Z Brassica rapa HOM05D004932 ORTHO05D005622 2.3e-128 462.6 322 79.2
C01p09950 Brassica napus HOM05D004932 ORTHO05D005622 5.2e-128 461.5 312 83.7
BolC1t00957H Brassica oleracea HOM05D004932 ORTHO05D005622 5.2e-128 461.5 312 83.7
CARHR237350 Cardamine hirsuta HOM05D004932 ORTHO05D005622 1.3e-123 446.8 309 81.9
BcaC01g01175 Brassica carinata HOM05D004932 ORTHO05D005622 9.5e-122 440.7 313 79.6
A08p19620 Brassica napus HOM05D004932 ORTHO05D005622 9.5e-122 440.7 313 80.2
BraA08t33920Z Brassica rapa HOM05D004932 ORTHO05D005622 4.7e-121 438.3 313 79.9
BolC3t21234H Brassica oleracea HOM05D004932 ORTHO05D005622 2.4e-120 436.0 313 79.6
C03p89240 Brassica napus HOM05D004932 ORTHO05D005622 2.6e-119 432.6 313 78.9
BcaB03g12610 Brassica carinata HOM05D004932 ORTHO05D005622 1.0e-115 420.6 312 78.2
THA.LOC104814605 Tarenaya hassleriana HOM05D004932 ORTHO05D005622 1.1e-109 400.6 310 73.2
Aa31LG2G20960 Aethionema arabicum HOM05D004932 ORTHO05D005622 7.8e-108 394.4 310 73.2
Gohir.D07G010400 Gossypium hirsutum HOM05D004932 ORTHO05D005622 6.2e-97 358.2 303 65.7
Gorai.001G010800 Gossypium raimondii HOM05D004932 ORTHO05D005622 6.2e-97 358.2 303 65.7
Duzib168G1170 Durio zibethinus HOM05D004932 ORTHO05D005622 1.1e-96 357.5 295 65.4
Eucgr.C00917 Eucalyptus grandis HOM05D004932 ORTHO05D005622 1.1e-96 357.5 301 64.8
Gohir.A07G010100 Gossypium hirsutum HOM05D004932 ORTHO05D005622 1.4e-96 357.1 303 66.0
PGR142G3354 Punica granatum HOM05D004932 ORTHO05D005622 2.4e-96 356.3 297 65.0
CANSAT56G0365 Cannabis sativa HOM05D004932 ORTHO05D005622 6.9e-96 354.8 305 63.9
Actinidia29889 Actinidia chinensis HOM05D004932 ORTHO05D005622 4.5e-95 352.1 302 63.6
Duzib150G0148 Durio zibethinus HOM05D004932 ORTHO05D005622 1.7e-94 350.1 306 63.7
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 4.9e-94 348.6 301 60.8
Manes.16G104000 Manihot esculenta HOM05D004932 ORTHO05D005622 4.9e-94 348.6 310 62.6
FAN26G1352 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.4e-94 347.8 296 64.2
FAN26G3436 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.4e-94 347.8 296 64.2
SalBow1G2721 Salvia bowleyana HOM05D004932 ORTHO05D005622 1.1e-93 347.4 305 58.7
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea HOM05D004932 ORTHO05D005622 2.4e-93 346.3 304 62.5
FAN19G2121 Fragaria x ananassa HOM05D004932 ORTHO05D005622 4.2e-93 345.5 296 64.2
MD15G1203900 Malus domestica HOM05D004932 ORTHO05D005622 4.2e-93 345.5 309 60.8
FAN28G1050 Fragaria x ananassa HOM05D004932 ORTHO05D005622 5.5e-93 345.1 296 64.2
Lj2g0005770 Lotus japonicus HOM05D004932 ORTHO05D005622 5.5e-93 345.1 294 64.3
Lalb_Chr24g0393881 Lupinus albus HOM05D004932 ORTHO05D005622 7.1e-93 344.7 302 61.9
FAN23G2709 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.2e-92 344.0 296 63.9
MSTRG.10579 Avicennia marina HOM05D004932 ORTHO05D005622 3.5e-92 342.4 309 60.2
FvH4_1g07000 Fragaria vesca HOM05D004932 ORTHO05D005622 3.5e-92 342.4 310 59.4
Ca_25616_v3 Cicer arietinum L. HOM05D004932 ORTHO05D005622 6.0e-92 341.7 295 62.7
PGSC0003DMG400008434 Solanum tuberosum HOM05D004932 ORTHO05D005622 1.0e-91 340.9 300 60.3
Medtr6g091780 Medicago truncatula HOM05D004932 ORTHO05D005622 1.3e-91 340.5 295 63.7
Manes.14G155500 Manihot esculenta HOM05D004932 ORTHO05D005622 1.8e-91 340.1 310 60.6
TWI63G1476 Tripterygium wilfordii HOM05D004932 ORTHO05D005622 1.8e-91 340.1 303 62.4
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea HOM05D004932 ORTHO05D005622 2.3e-91 339.7 306 62.7
Atru.chr7.1544 Acer truncatum HOM05D004932 ORTHO05D005622 5.1e-91 338.6 309 61.8
EL10Ac8g19275 Beta vulgaris HOM05D004932 ORTHO05D005622 6.7e-91 338.2 306 61.4
Thecc.09G093000 Theobroma cacao HOM05D004932 ORTHO05D005622 8.7e-91 337.8 296 63.2
Nitab4.5_0007297g0010 Nicotiana tabacum HOM05D004932 ORTHO05D005622 3.3e-90 335.9 305 59.0
Solyc07g032250.4 Solanum lycopersicum HOM05D004932 ORTHO05D005622 3.3e-90 335.9 300 60.3
Nitab4.5_0000713g0230 Nicotiana tabacum HOM05D004932 ORTHO05D005622 7.4e-90 334.7 305 59.3
Sopen07g015910 Solanum pennellii HOM05D004932 ORTHO05D005622 1.3e-89 334.0 300 60.3
Zm00001eb376850 Zea mays HOM05D004932 ORTHO05D005622 3.7e-89 332.4 308 58.4
QL02p063162 Quercus lobata HOM05D004932 ORTHO05D005622 1.1e-88 330.9 306 60.5
Dinv42295 Davidia involucrata HOM05D004932 ORTHO05D005622 1.2e-87 327.4 307 57.3
MELO3C015448.2 Cucumis melo HOM05D004932 ORTHO05D005622 1.5e-87 327.0 302 60.3
CAN.G1837.4 Capsicum annuum HOM05D004932 ORTHO05D005622 2.0e-87 326.6 308 56.8
Cpa.g.sc7.248 Carica papaya HOM05D004932 ORTHO05D005622 2.6e-87 326.2 309 61.2
Glyma.07G128200 Glycine max HOM05D004932 ORTHO05D005622 2.6e-87 326.2 305 59.7
Potri.018G067300 Populus trichocarpa HOM05D004932 ORTHO05D005622 2.2e-86 323.2 303 58.7
CsaV3_1G040210 Cucumis sativus L. HOM05D004932 ORTHO05D005622 2.9e-86 322.8 305 59.7
CsaV3_UNG060480 Cucumis sativus L. HOM05D004932 ORTHO05D005622 2.9e-86 322.8 305 59.7
Aqoxy7G01262 Aquilegia oxysepala HOM05D004932 ORTHO05D005622 3.8e-86 322.4 306 56.2
COL.COLO4_18228 Corchorus olitorius HOM05D004932 ORTHO05D005622 3.8e-86 322.4 306 60.5
GSVIVG01015235001 Vitis vinifera HOM05D004932 ORTHO05D005622 3.8e-86 322.4 304 59.2
Dinv36742 Davidia involucrata HOM05D004932 ORTHO05D005622 4.9e-86 322.0 303 59.7
Os06g0150400 Oryza sativa ssp. japonica HOM05D004932 ORTHO05D005622 6.5e-86 321.6 280 62.1
MD02G1074400 Malus domestica HOM05D004932 ORTHO05D005622 1.1e-85 320.9 310 59.7
ClCG03G015800 Citrullus lanatus HOM05D004932 ORTHO05D005622 1.4e-85 320.5 301 59.1
Prupe.7G213500 Prunus persica HOM05D004932 ORTHO05D005622 3.2e-85 319.3 309 58.3
Nn6g35421 Nelumbo nucifera HOM05D004932 ORTHO05D005622 7.1e-85 318.2 308 57.5
Sabra18G0059800 Salix brachista HOM05D004932 ORTHO05D005622 7.1e-85 318.2 306 58.5
Lj7C672T15 Lonicera japonica HOM05D004932 ORTHO05D005622 9.3e-85 317.8 298 57.0
Medtr6g090810 Medicago truncatula HOM05D004932 ORTHO05D005622 6.0e-84 315.1 300 60.7
CiPaw.03G218800 Carya illinoinensis HOM05D004932 ORTHO05D005622 1.0e-83 314.3 302 58.9
Lalb_Chr14g0375311 Lupinus albus HOM05D004932 ORTHO05D005622 1.3e-83 313.9 298 56.7
Cc06_g11080 Coffea canephora HOM05D004932 ORTHO05D005622 2.3e-83 313.2 304 57.2
RcHm_v2.0_Chr2g0092951 Rosa chinensis HOM05D004932 ORTHO05D005622 3.9e-83 312.4 309 57.9
Phvul.004G172100 Phaseolus vulgaris HOM05D004932 ORTHO05D005622 1.5e-82 310.5 305 59.0
PSO210G2479 Papaver somniferum HOM05D004932 ORTHO05D005622 5.7e-82 308.5 300 57.0
Sc18g0001850 Simmondsia chinensis HOM05D004932 ORTHO05D005622 1.3e-81 307.4 262 64.5
VMungo0464G1844 Vigna mungo HOM05D004932 ORTHO05D005622 1.6e-81 307.0 284 59.9
ECA234G2984 Erigeron canadensis HOM05D004932 ORTHO05D005622 2.8e-81 306.2 272 59.6
Glyma.01G003700 Glycine max HOM05D004932 ORTHO05D005622 4.8e-81 305.4 306 58.2
Ciclev10009015m.g Citrus clementina HOM05D004932 ORTHO05D005622 8.2e-81 304.7 309 58.6
CDE05G0556 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 1.1e-80 304.3 302 57.0
CSS0009775 Camellia sinensis var. sinensis HOM05D004932 ORTHO05D005622 1.4e-80 303.9 303 58.7
Haze_25884 Corylus avellana HOM05D004932 ORTHO05D005622 5.3e-80 302.0 302 57.6
Oeu000325.1 Olea europaea HOM05D001440 ORTHO05D005622 6.9e-80 301.6 244 65.6
Medtr6g092180 Medicago truncatula HOM05D004932 ORTHO05D005622 1.5e-79 300.4 300 59.0
PSO210G4737 Papaver somniferum HOM05D004932 ORTHO05D005622 3.4e-79 299.3 292 57.5
Migut.K00580 Erythranthe guttata HOM05D004932 ORTHO05D005622 5.9e-79 298.5 310 55.2
Psat1g049760 Pisum sativum HOM05D004932 ORTHO05D005622 7.7e-79 298.1 293 58.4
HPP92_004560 Vanilla planifolia HOM05D004932 ORTHO05D005622 7.7e-79 298.1 310 54.2
ATR0789G094 Amborella trichopoda HOM05D004932 ORTHO05D005622 2.9e-78 296.2 302 51.7
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea HOM05D004932 ORTHO05D005622 1.4e-77 293.9 308 58.1
TPR.G35493 Trifolium pratense HOM05D004932 ORTHO05D005622 1.9e-77 293.5 296 57.8
vmacro06275 Vaccinium macrocarpon HOM05D004932 ORTHO05D005622 5.5e-77 292.0 306 56.5
AUR62031253 Chenopodium quinoa HOM05D004932 ORTHO05D005622 9.4e-77 291.2 303 52.5
AUR62027447 Chenopodium quinoa HOM05D004932 ORTHO05D005622 1.2e-76 290.8 303 53.1
Lsat_1_v5_gn_5_145840 Lactuca sativa HOM05D004932 ORTHO05D005622 3.6e-76 289.3 305 55.7
Sed0008469 Sechium edule HOM05D004932 ORTHO05D005622 6.1e-76 288.5 217 67.7
HanXRQChr10g0319131 Helianthus annuus HOM05D004932 ORTHO05D005622 7.9e-76 288.1 309 53.7
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea HOM05D004932 ORTHO05D005622 1.8e-75 287.0 307 57.7
Peaxi162Scf00444g00617 Petunia axillaris HOM05D004932 ORTHO05D005622 1.8e-75 287.0 305 51.1
SGA_v2.0_scaffold10G05207 Striga asiatica HOM05D004932 ORTHO05D005622 4.3e-74 282.3 363 49.0
CDE05G1139 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 5.7e-74 282.0 238 63.9
unitig_749.g14227 Utricularia gibba HOM05D004932 ORTHO05D005622 5.7e-74 282.0 305 53.1
Ah.09g228480 Amaranthus hybridus HOM05D004932 ORTHO05D005622 7.4e-74 281.6 304 52.0
SEGI_24488 Sequoiadendron giganteum HOM05D004932 ORTHO05D005622 9.7e-74 281.2 290 52.8
DCAR_011989 Daucus carota HOM05D004932 ORTHO05D005622 3.8e-70 269.2 271 56.1
Rhsim03G0234400 Rhododendron simsii HOM05D004932 ORTHO05D005622 1.8e-67 260.4 303 52.1
Medtr6g092150 Medicago truncatula HOM05D004932 ORTHO05D005622 1.5e-63 247.3 319 50.5
unitig_78.g29619 Utricularia gibba HOM05D004932 ORTHO05D005622 1.5e-63 247.3 282 51.4
TAR365G0154 Trochodendron aralioides HOM05D004932 ORTHO05D005622 3.8e-62 242.7 224 54.9
SHI02816 Sapria himalayana HOM05D004932 ORTHO05D005622 2.5e-61 240.0 231 55.4
Mapoly0075s0048 Marchantia polymorpha HOM05D004932 ORTHO05D005622 7.2e-61 238.4 319 47.3
Pp3c4_19450 Physcomitrium patens HOM05D004932 ORTHO05D005622 3.0e-59 233.0 309 47.2
Cfa003116 Carpinus fangiana HOM05D004932 ORTHO05D005622 5.3e-56 222.2 230 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis HOM05D004932 ORTHO05D005622 1.7e-54 217.2 202 56.9
HanXRQChr12g0355371 Helianthus annuus HOM05D004932 ORTHO05D005622 4.2e-53 212.6 302 46.7
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea HOM05D004932 ORTHO05D005622 1.7e-49 200.7 186 56.5
SMO361G0136 Selaginella moellendorffii HOM05D004932 ORTHO05D005622 2.5e-45 186.8 327 40.7
CBR_g8029 Chara braunii HOM05D004932 ORTHO05D005622 1.4e-43 181.0 215 43.3
Cc06_g18040 Coffea canephora HOM05D004932 ORTHO05D005622 8.9e-35 151.8 202 45.0
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea HOM05D004932 ORTHO05D005622 1.8e-32 144.1 98 72.4
unitig_26.g9168 Utricularia gibba HOM05D004932 ORTHO05D005622 2.3e-30 137.1 141 54.6
Oeu037599.1 Olea europaea HOM05D004932 ORTHO05D005622 2.3e-27 127.1 290 37.9
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 3.7e-25 119.8 134 51.5
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 3.7e-25 119.8 134 51.5
MCO04G519 Micromonas commoda HOM05D004932 ORTHO05D005622 9.2e-24 115.2 199 33.7
Cre03.g151700 Chlamydomonas reinhardtii HOM05D004932 ORTHO05D005622 2.0e-23 114.0 219 32.0
PRCOL_00005979 Prasinoderma coloniale HOM05D004932 ORTHO05D005622 2.7e-23 113.6 228 31.1
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea HOM05D004932 ORTHO05D005622 7.3e-21 105.5 67 73.1
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.8e-19 100.9 67 68.7
CARHR109770 Cardamine hirsuta HOM05D004932 ORTHO05D005622 6.8e-19 99.0 119 53.8
RcHm_v2.0_Chr5g0016971 Rosa chinensis HOM05D004932 ORTHO05D005622 1.9e-16 90.9 64 67.2
RcHm_v2.0_Chr4g0402141 Rosa chinensis HOM05D004932 ORTHO05D005622 4.1e-16 89.7 61 68.9
Hma1.2p1_1881F.1_g306380 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.9e-13 80.9 52 69.2
Oeu037598.1 Olea europaea HOM05D004932 ORTHO05D005622 2.0e-10 70.9 96 55.2
CiPaw.05G072200 Carya illinoinensis HOM05D004932 ORTHO05D005622 5.8e-10 69.3 50 60.0
Nn3g21874 Nelumbo nucifera HOM05D004932 ORTHO05D005622 1.7e-09 67.8 45 62.2
Nn2g13205 Nelumbo nucifera HOM05D004932 ORTHO05D005622 6.4e-09 65.9 61 55.7
arahy.Tifrunner.gnm1.ann1.P1T2M1 Arachis hypogaea HOM05D000368 ORTHO05D000289 8.3e-09 65.5 39 76.9
Medtr6g077350 Medicago truncatula HOM05D004932 ORTHO05D005622 5.4e-08 62.8 49 63.3
unitig_26.g9167 Utricularia gibba HOM05D004932 ORTHO05D005622 5.4e-08 62.8 119 44.5
TAR636G2165 Trochodendron aralioides HOM05D004932 ORTHO05D005622 6.6e-06 55.8 54 50.0


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