Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 3.4e-56 221.5 114 100.0
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 1.1e-46 189.9 115 83.5
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 2.0e-45 185.7 117 82.9
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 8.3e-39 163.7 124 74.2
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 4.1e-38 161.4 114 76.3
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 7.1e-38 160.6 124 71.8
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 7.1e-38 160.6 124 71.8
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 9.2e-38 160.2 124 72.6
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 1.2e-37 159.8 124 71.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 1.2e-37 159.8 124 71.0
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.2e-37 159.8 122 73.8
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 3.3e-35 151.8 120 70.8
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 1.3e-28 129.8 122 57.4
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.0e-24 115.9 87 63.2
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.7e-23 112.8 105 59.0
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 2.9e-23 112.1 102 56.9
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.9e-23 112.1 103 59.2
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 1.9e-22 109.4 92 59.8
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 2.4e-22 109.0 111 53.2
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-22 109.0 82 63.4
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 3.2e-22 108.6 85 62.4
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 4.2e-22 108.2 117 48.7
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 4.2e-22 108.2 93 61.3
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 4.2e-22 108.2 92 59.8
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 5.4e-22 107.8 119 54.6
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 5.4e-22 107.8 83 63.9
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 7.1e-22 107.5 120 49.2
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 9.3e-22 107.1 117 49.6
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 9.3e-22 107.1 87 58.6
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-21 106.7 82 63.4
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 1.6e-21 106.3 118 54.2
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-21 106.3 82 63.4
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.6e-21 106.3 82 63.4
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.6e-21 106.3 103 55.3
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.6e-21 106.3 81 61.7
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 1.6e-21 106.3 87 59.8
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 2.7e-21 105.5 93 58.1
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 3.5e-21 105.1 82 62.2
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 3.5e-21 105.1 93 58.1
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 3.5e-21 105.1 93 59.1
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 7.8e-21 104.0 91 57.1
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 7.8e-21 104.0 93 59.1
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 1.0e-20 103.6 85 52.9
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.3e-20 103.2 83 59.0
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 2.3e-20 102.4 104 52.9
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 3.0e-20 102.1 83 59.0
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 3.0e-20 102.1 87 59.8
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 3.9e-20 101.7 89 57.3
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 3.9e-20 101.7 89 57.3
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 3.9e-20 101.7 81 59.3
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 3.9e-20 101.7 86 59.3
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 6.6e-20 100.9 86 54.7
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 6.6e-20 100.9 105 51.4
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 1.1e-19 100.1 93 52.7
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 1.9e-19 99.4 81 60.5
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.9e-19 99.4 87 57.5
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 2.5e-19 99.0 88 56.8
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 2.5e-19 99.0 117 48.7
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 2.5e-19 99.0 105 48.6
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 2.5e-19 99.0 82 54.9
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 4.3e-19 98.2 98 54.1
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 5.6e-19 97.8 98 50.0
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 7.3e-19 97.4 67 64.2
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 7.3e-19 97.4 97 51.5
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 9.6e-19 97.1 90 51.1
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 9.6e-19 97.1 107 49.5
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 9.6e-19 97.1 100 49.0
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 2.1e-18 95.9 83 61.4
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 2.1e-18 95.9 79 58.2
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 2.1e-18 95.9 89 57.3
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 2.8e-18 95.5 74 63.5
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.8e-18 95.5 87 52.9
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 2.8e-18 95.5 97 51.5
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 2.8e-18 95.5 81 59.3
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 3.6e-18 95.1 124 46.0
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 6.2e-18 94.4 123 45.5
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 8.1e-18 94.0 77 59.7
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.1e-17 93.6 81 56.8
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 1.8e-17 92.8 78 59.0
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 1.8e-17 92.8 90 56.7
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 2.4e-17 92.4 74 59.5
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 2.6e-16 89.0 56 71.4
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 5.8e-16 87.8 78 57.7
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 7.6e-16 87.4 90 52.2
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 2.9e-15 85.5 57 70.2
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 2.9e-15 85.5 62 61.3
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 6.4e-15 84.3 71 53.5
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.1e-14 83.6 65 61.5
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 2.4e-14 82.4 48 75.0
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 2.4e-14 82.4 62 62.9
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 1.0e-12 77.0 57 61.4
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 1.8e-12 76.3 86 44.2
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 9.0e-09 63.9 48 60.4
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 9.9e-08 60.5 43 60.5
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 6.4e-07 57.8 51 58.8
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 9.3e-06 53.9 40 57.5
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.3e-06 53.9 45 62.2
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.3e-06 53.9 46 60.9


User provided reference genes

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