Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 5.1e-106 387.9 214 100.0
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 5.8e-102 374.4 214 88.3
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 6.3e-96 354.4 216 89.8
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 8.2e-96 354.0 214 92.1
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 1.8e-95 352.8 214 92.1
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 1.8e-95 352.8 214 92.1
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 3.1e-95 352.1 214 92.1
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 3.1e-95 352.1 214 92.1
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 4.1e-95 351.7 218 91.3
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 1.2e-94 350.1 218 90.8
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 2.0e-94 349.4 218 91.7
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 4.5e-94 348.2 217 90.8
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 1.7e-93 346.3 214 83.6
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 2.2e-93 345.9 218 89.9
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 6.5e-93 344.4 217 90.3
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 6.5e-93 344.4 217 90.3
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 6.5e-93 344.4 217 90.3
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 1.3e-90 336.7 214 85.0
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 3.3e-89 332.0 214 78.0
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 1.2e-83 313.5 216 72.2
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 1.3e-77 293.5 169 81.1
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 3.8e-77 292.0 169 80.5
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 8.5e-77 290.8 169 79.3
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 1.9e-76 289.7 169 80.5
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 9.4e-76 287.3 170 80.6
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 1.6e-75 286.6 169 78.7
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 2.7e-75 285.8 170 80.0
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 2.7e-75 285.8 169 78.1
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.4e-74 283.5 170 78.8
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 3.0e-74 282.3 169 75.7
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 5.1e-74 281.6 169 76.3
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 5.1e-74 281.6 169 78.1
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 6.7e-74 281.2 169 76.3
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 8.8e-74 280.8 169 76.9
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.1e-73 280.4 169 76.3
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 1.5e-73 280.0 170 78.2
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.5e-73 280.0 169 78.1
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 3.3e-73 278.9 169 76.9
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 3.3e-73 278.9 169 75.7
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 4.4e-73 278.5 169 76.3
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 7.4e-73 277.7 169 76.9
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 9.7e-73 277.3 170 76.5
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 1.3e-72 276.9 169 74.6
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.3e-72 276.9 169 75.7
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.7e-72 276.6 169 76.3
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 2.2e-72 276.2 170 74.7
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 2.8e-72 275.8 169 74.6
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 3.7e-72 275.4 170 74.7
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 3.7e-72 275.4 170 75.3
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 3.7e-72 275.4 169 77.5
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 4.8e-72 275.0 169 74.6
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 8.2e-72 274.2 170 75.3
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 1.1e-71 273.9 169 74.6
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 5.3e-71 271.6 169 74.0
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 5.3e-71 271.6 169 74.0
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 9.1e-71 270.8 170 75.3
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 1.2e-70 270.4 169 73.4
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 2.0e-70 269.6 205 63.9
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 2.0e-70 269.6 169 72.8
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.6e-70 269.2 169 75.1
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 3.5e-70 268.9 169 72.8
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 5.9e-70 268.1 170 74.1
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 7.7e-70 267.7 170 74.1
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 7.7e-70 267.7 169 72.2
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 1.0e-69 267.3 169 74.6
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 1.3e-69 266.9 169 75.1
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 3.8e-69 265.4 198 64.6
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 8.5e-69 264.2 169 72.2
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 1.1e-68 263.8 169 71.6
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 1.9e-68 263.1 169 72.2
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 2.5e-68 262.7 214 59.8
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 2.5e-68 262.7 169 69.8
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 3.2e-68 262.3 215 60.5
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 3.2e-68 262.3 169 72.8
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 5.5e-68 261.5 169 71.6
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 5.5e-68 261.5 169 72.2
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 9.4e-68 260.8 166 71.7
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 1.6e-67 260.0 169 70.4
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.6e-67 260.0 169 69.2
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 3.6e-67 258.8 170 70.0
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 4.7e-67 258.5 170 71.8
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 4.7e-67 258.5 169 71.0
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 1.8e-66 256.5 170 72.4
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 2.3e-66 256.1 169 72.8
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 2.3e-66 256.1 215 60.5
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 3.0e-66 255.8 170 71.2
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 3.0e-66 255.8 170 71.2
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 6.7e-66 254.6 170 71.2
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 6.7e-66 254.6 170 70.6
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 8.8e-66 254.2 169 68.6
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 8.8e-66 254.2 170 70.6
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 1.1e-65 253.8 161 73.9
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 1.5e-65 253.4 170 70.0
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 2.0e-65 253.1 170 70.6
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 2.6e-65 252.7 170 70.6
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 3.3e-65 252.3 170 68.8
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 5.7e-65 251.5 170 69.4
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 3.7e-64 248.8 170 68.8
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 1.1e-63 247.3 170 69.4
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 3.1e-63 245.7 170 68.8
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 3.1e-63 245.7 169 68.0
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 7.0e-63 244.6 169 67.5
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 9.1e-63 244.2 149 75.8
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 1.3e-61 240.4 170 66.5
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 2.2e-61 239.6 189 60.8
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 2.1e-59 233.0 171 65.5
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 6.1e-59 231.5 171 65.5
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.0e-58 230.7 168 66.1
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 2.3e-58 229.6 190 58.9
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 3.0e-58 229.2 188 59.6
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 7.5e-57 224.6 189 58.2
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 9.8e-57 224.2 286 45.1
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 3.1e-55 219.2 171 62.6
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 3.1e-55 219.2 171 62.6
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 4.1e-55 218.8 256 45.7
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 4.5e-54 215.3 171 60.8
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 7.7e-54 214.5 169 58.6
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.8e-50 203.4 134 71.6
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 2.3e-50 203.0 134 71.6
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 2.6e-49 199.5 169 56.8
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 6.3e-48 194.9 140 64.3
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 5.0e-45 185.3 112 74.1
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 2.5e-44 183.0 104 79.8
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 3.0e-42 176.0 93 90.3
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 4.0e-42 175.6 149 61.1
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 5.2e-42 175.3 91 91.2
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 6.8e-42 174.9 104 76.9
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 6.8e-42 174.9 104 75.0
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.2e-40 169.9 105 72.4
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 6.4e-40 168.3 93 81.7
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 7.0e-39 164.9 103 70.9
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 3.5e-38 162.5 107 69.2
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 1.3e-37 160.6 123 64.2
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 1.5e-36 157.1 134 56.7
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 2.1e-35 153.3 113 60.2
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 4.0e-34 149.1 85 81.2
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 2.6e-33 146.4 113 58.4
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 1.3e-32 144.1 79 84.8
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 1.3e-32 144.1 79 84.8
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 2.5e-28 129.8 90 72.2
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.3e-21 106.7 72 68.1
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 3.1e-18 96.3 66 71.2
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 4.9e-16 89.0 76 55.3
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 5.1e-13 79.0 59 62.7
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.1e-12 77.8 78 47.4
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 6.2e-11 72.0 54 57.4
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 1.4e-10 70.9 51 58.8
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.8e-10 70.5 48 70.8
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 3.1e-10 69.7 46 60.9
BolC3t21104H Brassica oleracea HOM05D046859 ORTHO05D040831 2.9e-08 63.2 50 64.0


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