Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 1.0e-47 193.0 91 100.0
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 1.3e-45 186.0 89 96.6
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.8e-44 182.2 88 95.5
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 2.0e-43 178.7 89 91.0
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 9.9e-43 176.4 89 91.0
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 6.4e-42 173.7 89 88.8
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 6.4e-42 173.7 92 89.1
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 6.4e-42 173.7 91 90.1
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 9.3e-41 169.9 89 88.8
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 1.0e-39 166.4 84 92.9
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 2.3e-39 165.2 84 91.7
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 3.0e-39 164.9 89 85.4
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 1.1e-38 162.9 84 90.5
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 4.3e-38 161.0 84 89.3
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 4.3e-38 161.0 84 89.3
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 7.4e-38 160.2 86 90.7
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.4e-33 146.0 85 78.8
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 1.2e-27 126.3 88 64.8
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 1.5e-27 125.9 89 65.2
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 4.5e-27 124.4 91 61.5
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 5.8e-27 124.0 89 64.0
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 7.6e-27 123.6 88 65.9
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.0e-26 123.2 88 64.8
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.0e-26 123.2 75 70.7
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 1.0e-26 123.2 75 70.7
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.7e-26 122.5 88 64.8
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 2.2e-26 122.1 88 67.0
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 2.2e-26 122.1 88 64.8
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 2.9e-26 121.7 86 61.6
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 2.9e-26 121.7 82 67.1
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 2.9e-26 121.7 83 65.1
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.8e-26 121.3 75 69.3
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 8.4e-26 120.2 82 64.6
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 8.4e-26 120.2 83 63.9
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 1.1e-25 119.8 85 60.0
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 1.1e-25 119.8 91 60.4
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 1.9e-25 119.0 81 65.4
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 3.2e-25 118.2 86 59.3
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 3.2e-25 118.2 86 59.3
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 4.2e-25 117.9 89 61.8
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 4.2e-25 117.9 89 61.8
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 4.2e-25 117.9 89 61.8
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 5.5e-25 117.5 91 61.5
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 7.1e-25 117.1 86 60.5
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 7.1e-25 117.1 76 64.5
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 9.3e-25 116.7 87 59.8
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 2.1e-24 115.5 76 63.2
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 3.5e-24 114.8 83 63.9
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 3.5e-24 114.8 83 60.2
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 3.5e-24 114.8 91 56.0
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 4.6e-24 114.4 75 66.7
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 6.0e-24 114.0 73 69.9
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 6.0e-24 114.0 83 60.2
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 7.9e-24 113.6 77 63.6
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.0e-23 113.2 76 67.1
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.3e-23 112.8 87 62.1
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.8e-23 112.5 82 59.8
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.8e-23 112.5 82 59.8
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.8e-23 112.5 75 66.7
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 1.8e-23 112.5 77 64.9
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 1.8e-23 112.5 77 64.9
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 2.3e-23 112.1 73 63.0
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 3.0e-23 111.7 79 60.8
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 3.9e-23 111.3 71 66.2
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 3.9e-23 111.3 87 60.9
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 5.1e-23 110.9 72 70.8
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 5.1e-23 110.9 72 70.8
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.5e-22 109.4 81 59.3
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.5e-22 109.4 82 56.1
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 3.3e-22 108.2 65 72.3
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 7.4e-22 107.1 66 74.2
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 9.7e-22 106.7 81 56.8
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 9.7e-22 106.7 73 61.6
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.3e-21 106.3 87 50.6
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.6e-21 105.9 72 62.5
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 1.6e-21 105.9 108 52.8
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 2.2e-21 105.5 61 77.0
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 2.2e-21 105.5 70 61.4
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 2.2e-21 105.5 73 58.9
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 2.8e-21 105.1 97 52.6
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.7e-21 104.8 87 57.5
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 6.3e-21 104.0 55 78.2
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.1e-20 103.2 69 63.8
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 1.1e-20 103.2 75 60.0
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.8e-20 102.4 92 51.1
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.4e-20 102.1 60 73.3
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.4e-20 102.1 60 73.3
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 2.4e-20 102.1 67 62.7
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 3.1e-20 101.7 72 58.3
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 5.3e-20 100.9 71 62.0
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 9.0e-20 100.1 60 70.0
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.5e-19 99.4 90 54.4
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 2.2e-18 95.5 59 71.2
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 3.2e-17 91.7 47 83.0
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 7.2e-17 90.5 59 66.1
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 7.2e-17 90.5 59 66.1
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.4e-15 86.3 73 54.8
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 1.8e-15 85.9 102 42.2
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 1.8e-15 85.9 54 61.1
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 3.0e-15 85.1 79 44.3
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 1.1e-14 83.2 73 46.6
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 2.5e-14 82.0 60 60.0
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.7e-13 79.3 49 65.3
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 4.1e-12 74.7 47 66.0
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 2.0e-11 72.4 49 65.3
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 1.1e-09 66.6 65 43.1
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 1.4e-07 59.7 42 52.4
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.8e-07 59.3 53 54.7
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 3.9e-07 58.2 41 58.5
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 2.0e-06 55.8 28 78.6
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 4.4e-06 54.7 28 78.6


User provided reference genes

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