Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 2.1e-122 443.0 332 100.0
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 5.3e-102 375.2 333 89.8
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.5e-101 373.6 333 89.5
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 5.3e-94 348.6 333 85.0
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 2.0e-69 266.9 329 62.3
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 4.2e-67 259.2 329 66.0
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 5.5e-67 258.8 330 63.3
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 3.6e-66 256.1 329 63.5
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 3.6e-66 256.1 329 63.5
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 8.0e-66 255.0 328 64.3
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 6.8e-65 251.9 330 71.8
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 3.4e-64 249.6 332 63.0
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 3.4e-64 249.6 332 63.0
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 1.1e-62 244.6 334 53.9
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 5.4e-62 242.3 333 55.9
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.6e-61 240.7 329 54.1
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 1.1e-41 174.9 336 63.1
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 4.4e-40 169.5 333 42.0
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 1.3e-39 167.9 286 66.8
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 3.2e-38 163.3 325 44.6
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 2.3e-36 157.1 287 65.2
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.9e-35 154.1 332 60.2
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 5.6e-35 152.5 314 36.6
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 1.1e-33 148.3 334 56.9
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 5.2e-33 146.0 287 62.0
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 1.5e-32 144.4 291 62.9
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.5e-32 144.4 288 49.3
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 2.6e-32 143.7 289 64.4
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 1.7e-31 141.0 290 60.0
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 4.9e-31 139.4 290 41.7
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 4.9e-31 139.4 332 39.2
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 4.9e-31 139.4 328 54.9
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 2.4e-30 137.1 286 47.9
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 2.4e-30 137.1 328 54.0
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 3.2e-30 136.7 332 31.6
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 4.2e-30 136.3 290 45.2
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 5.4e-30 136.0 331 41.1
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 5.4e-30 136.0 310 59.4
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 9.2e-30 135.2 311 57.6
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 1.2e-29 134.8 332 31.0
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 3.5e-29 133.3 278 49.3
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 1.3e-28 131.3 335 43.6
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.7e-28 131.0 326 30.4
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 1.7e-28 131.0 291 58.1
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 3.0e-28 130.2 284 45.4
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 3.9e-28 129.8 282 62.8
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 3.9e-28 129.8 282 62.8
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 6.6e-28 129.0 313 36.7
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 8.7e-28 128.6 329 46.8
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 1.9e-27 127.5 290 61.0
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 4.3e-27 126.3 319 54.2
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 9.6e-27 125.2 329 46.5
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 2.8e-26 123.6 283 44.5
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 4.7e-26 122.9 304 31.6
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 1.4e-25 121.3 299 32.4
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 1.8e-25 120.9 289 56.7
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 5.3e-25 119.4 281 31.0
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 2.0e-24 117.5 326 54.0
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.0e-24 117.5 329 46.8
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 3.4e-24 116.7 318 55.0
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 9.9e-24 115.2 288 49.7
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 1.7e-23 114.4 290 60.7
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 1.9e-22 110.9 299 58.5
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 2.4e-22 110.5 322 36.3
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 3.2e-22 110.2 287 40.1
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 6.0e-21 105.9 292 44.5
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 1.3e-20 104.8 288 58.3
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 2.5e-19 100.5 284 43.3
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 3.3e-19 100.1 292 42.8
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 1.6e-18 97.8 104 47.1
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 2.1e-18 97.4 274 62.0
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.2e-16 91.7 288 50.7
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.5e-16 91.3 288 50.3
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 2.0e-16 90.9 131 42.0
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 2.6e-16 90.5 81 54.3
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 7.6e-16 89.0 145 39.3
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 1.1e-14 85.1 300 56.7
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 2.4e-14 84.0 276 25.4
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 4.6e-13 79.7 148 35.8
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.0e-12 78.6 250 47.6
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 1.0e-12 78.6 119 37.8
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.3e-12 77.4 133 36.8
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.1e-11 75.1 287 49.5
ATR0030G034 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.6e-11 72.8 115 37.4
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 7.4e-11 72.4 82 46.3
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 8.1e-10 68.9 128 34.4
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 3.1e-09 67.0 78 48.7
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 4.5e-08 63.2 80 45.0
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 9.9e-08 62.0 106 34.0


User provided reference genes

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