Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0004s1232 Capsella rubella HOM05D011249 ORTHO05D013690 2.1e-39 165.2 85 100.0
AL426U10010 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 2.9e-36 154.8 85 92.9
AL4G26250 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 2.9e-36 154.8 85 92.9
AT2G31082 Arabidopsis thaliana HOM05D011249 ORTHO05D013690 3.2e-35 151.4 84 91.7
CARHR124650 Cardamine hirsuta HOM05D011249 ORTHO05D013690 1.3e-33 146.0 85 87.1
Sp4g13560 Schrenkiella parvula HOM05D011249 ORTHO05D013690 4.9e-28 127.5 85 81.2
BcaB06g28483 Brassica carinata HOM05D011249 ORTHO05D013690 1.9e-27 125.6 85 78.8
BcaB06g28486 Brassica carinata HOM05D011249 ORTHO05D013690 1.9e-27 125.6 85 78.8
C04p60310 Brassica napus HOM05D011249 ORTHO05D013690 1.9e-27 125.6 85 78.8
BolC4t27532H Brassica oleracea HOM05D011249 ORTHO05D013690 1.9e-27 125.6 85 78.8
BcaB06g28410 Brassica carinata HOM05D011249 ORTHO05D013690 3.2e-27 124.8 85 77.6
BcaB01g04066 Brassica carinata HOM05D011249 ORTHO05D013690 1.2e-26 122.9 85 78.8
A04p23830 Brassica napus HOM05D011249 ORTHO05D013690 1.6e-26 122.5 84 75.0
BraA04t17907Z Brassica rapa HOM05D011249 ORTHO05D013690 1.6e-26 122.5 85 76.5
Thhalv10017928m.g Eutrema salsugineum HOM05D011249 ORTHO05D013690 3.5e-26 121.3 85 77.6
Aa31LG5G5830 Aethionema arabicum HOM05D011249 ORTHO05D013690 1.3e-12 76.3 51 76.5
Manes.16G036050 Manihot esculenta HOM05D012232 ORTHO05D013262 1.4e-06 56.2 81 38.3
Manes.17G053400 Manihot esculenta HOM05D012232 ORTHO05D013262 5.3e-06 54.3 83 41.0


User provided reference genes

Program Settings