Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0004s1231 Capsella rubella HOM05D009623 ORTHO05D011251 4.1e-37 157.5 78 100.0
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 2.2e-30 135.2 82 82.9
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 1.4e-29 132.5 82 82.9
CARHR124630 Cardamine hirsuta HOM05D009623 ORTHO05D011251 7.0e-29 130.2 82 79.3
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 2.7e-28 128.3 81 81.5
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 2.9e-27 124.8 82 79.3
BcaB06g28408 Brassica carinata HOM05D009623 ORTHO05D011251 2.9e-27 124.8 83 78.3
BraA04t17906Z Brassica rapa HOM05D009623 ORTHO05D011251 5.0e-27 124.0 83 77.1
A04p23810 Brassica napus HOM05D009623 ORTHO05D011251 6.5e-27 123.6 83 77.1
BcaB06g28482 Brassica carinata HOM05D009623 ORTHO05D011251 4.2e-26 120.9 83 75.9
C04p60300 Brassica napus HOM05D009623 ORTHO05D011251 4.2e-26 120.9 83 75.9
BolC4t27531H Brassica oleracea HOM05D009623 ORTHO05D011251 4.2e-26 120.9 83 75.9
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 9.1e-21 103.2 84 70.2
THA.LOC109116767 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 1.3e-19 99.4 82 62.2
AT1G06225 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 1.5e-18 95.9 84 63.1
AL1G16210 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 1.2e-17 92.8 84 60.7
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 3.6e-17 91.3 84 63.1
BcaB02g06813 Brassica carinata HOM05D009623 ORTHO05D011251 3.0e-16 88.2 84 59.5
BraA10t42755Z Brassica rapa HOM05D009623 ORTHO05D011251 6.8e-16 87.0 84 59.5
THA.LOC104800858 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 6.8e-16 87.0 82 57.3
Carub.0001s0558 Capsella rubella HOM05D009623 ORTHO05D011251 1.2e-15 86.3 82 58.5
A10p04840 Brassica napus HOM05D009623 ORTHO05D011251 1.5e-15 85.9 84 58.3
BolC5t29225H Brassica oleracea HOM05D009623 ORTHO05D011251 2.2e-14 82.0 84 54.8
BcaC05g24293 Brassica carinata HOM05D009623 ORTHO05D011251 6.3e-14 80.5 84 53.6
C05p04540 Brassica napus HOM05D009623 ORTHO05D011251 6.3e-14 80.5 84 53.6
Ciclev10017647m.g Citrus clementina HOM05D009623 ORTHO05D011251 1.6e-09 65.9 84 45.2
Prupe.4G170900 Prunus persica HOM05D009672 ORTHO05D011357 1.6e-09 65.9 78 50.0
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.2e-07 59.7 82 41.5
Cpa.g.sc209.26 Carica papaya HOM05D009623 ORTHO05D011251 2.6e-07 58.5 89 43.8
C06p34240 Brassica napus HOM05D009672 ORTHO05D011357 1.3e-06 56.2 83 39.8
BcaC08g45667 Brassica carinata HOM05D009672 ORTHO05D011357 2.9e-06 55.1 81 42.0
Cfa014706 Carpinus fangiana HOM05D017147 ORTHO05D011251 3.7e-06 54.7 83 42.2
Haze_09355 Corylus avellana HOM05D009672 ORTHO05D011357 4.9e-06 54.3 78 41.0
Carub.0002s1994 Capsella rubella HOM05D009672 ORTHO05D011357 8.3e-06 53.5 82 40.2


User provided reference genes

Program Settings