Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.7e-288 995.3 506 100.0
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 3.4e-257 891.3 506 89.5
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 5.0e-253 877.5 512 88.3
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 8.6e-253 876.7 513 89.5
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.4e-247 859.4 513 86.9
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.2e-241 839.7 513 84.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 2.5e-236 822.0 514 81.9
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.1e-234 816.6 508 82.5
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.1e-234 816.6 509 82.3
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.5e-233 812.8 510 80.6
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 9.8e-233 810.1 508 80.5
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.0e-213 746.9 514 74.9
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 5.6e-212 741.1 424 86.1
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.4e-191 673.3 452 81.2
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 5.9e-177 624.8 516 62.6
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.1e-175 620.5 513 61.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 4.2e-175 618.6 520 61.7
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 4.6e-174 615.1 518 62.0
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 7.9e-174 614.4 518 62.2
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 2.3e-173 612.8 516 61.2
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 5.7e-172 608.2 516 61.4
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.2e-171 606.3 525 59.4
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.2e-171 606.3 513 62.0
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 3.7e-171 605.5 513 61.2
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 4.8e-171 605.1 518 60.6
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 1.1e-170 604.0 514 61.3
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.8e-170 603.2 516 60.7
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.4e-170 602.8 520 60.0
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 4.1e-170 602.1 519 60.5
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 5.3e-170 601.7 516 61.2
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.9e-170 601.3 516 60.9
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 1.2e-169 600.5 513 60.6
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 2.0e-169 599.7 515 59.2
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 2.0e-169 599.7 522 58.6
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 3.4e-169 599.0 519 60.3
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 3.4e-169 599.0 544 58.6
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.5e-169 598.6 513 61.0
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 5.9e-169 598.2 515 59.0
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 5.9e-169 598.2 522 59.6
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 7.7e-169 597.8 521 60.7
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.0e-168 597.4 517 59.8
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.3e-168 597.0 508 59.8
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.2e-168 596.3 516 60.7
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 2.9e-168 595.9 522 58.8
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 5.0e-168 595.1 459 63.8
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 5.0e-168 595.1 523 59.5
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.5e-168 594.7 459 63.6
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 8.5e-168 594.3 517 59.4
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 8.5e-168 594.3 518 58.9
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 1.1e-167 594.0 521 59.5
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 2.5e-167 592.8 459 65.4
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.2e-167 592.4 519 58.8
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 7.2e-167 591.3 511 59.7
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.2e-166 590.5 505 61.2
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.7e-166 589.3 459 63.0
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.6e-166 589.0 459 63.2
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.4e-165 587.0 522 58.6
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.0e-165 585.9 515 58.1
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.9e-165 585.5 522 58.2
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 8.8e-165 584.3 508 59.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 4.4e-164 582.0 450 63.3
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.4e-164 582.0 512 59.4
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 1.3e-163 580.5 521 57.8
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 8.2e-163 577.8 520 58.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.8e-162 576.6 518 58.1
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 3.1e-162 575.9 478 62.1
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 9.1e-162 574.3 514 59.5
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 2.6e-161 572.8 514 58.4
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.8e-160 568.9 457 62.6
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 4.2e-159 565.5 452 63.1
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 7.2e-159 564.7 451 63.0
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 7.2e-159 564.7 452 63.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 9.4e-159 564.3 461 61.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.2e-158 563.9 483 60.5
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 2.1e-158 563.1 506 57.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.7e-158 562.8 517 56.7
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 6.1e-158 561.6 516 55.6
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.4e-157 560.5 483 60.2
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.0e-157 559.3 499 58.3
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 4.0e-157 558.9 452 62.4
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.4e-156 555.4 489 58.5
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.8e-154 550.1 457 61.5
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 9.1e-154 547.7 484 57.6
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.5e-153 545.4 480 57.3
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 4.5e-153 545.4 460 60.9
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 3.2e-151 539.3 461 60.5
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.6e-150 537.0 513 55.2
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 3.0e-149 532.7 451 60.3
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 9.8e-148 527.7 487 57.3
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 9.8e-148 527.7 513 56.9
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 7.0e-146 521.5 513 54.2
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.8e-144 515.8 434 61.5
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 2.7e-142 509.6 423 59.6
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.8e-125 453.8 402 56.2
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.5e-124 450.7 431 53.1
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.1e-122 444.5 429 52.2
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 9.2e-122 441.4 423 52.7
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 4.6e-121 439.1 358 60.3
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.3e-120 437.6 385 58.4
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 2.3e-104 383.6 342 55.8
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 3.3e-103 379.8 434 44.9
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.0e-96 356.7 287 63.4
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 7.4e-87 325.5 259 59.5
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 6.9e-85 318.9 444 40.1
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.4e-69 267.3 427 40.0
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 6.5e-67 259.2 270 55.6
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 3.3e-63 246.9 421 34.9
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.2e-62 244.2 231 57.1
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 4.1e-61 240.0 439 33.5
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 3.0e-56 223.8 153 72.5
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 5.9e-52 209.5 134 76.9
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 3.6e-41 173.7 178 48.3
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 8.0e-33 146.0 218 39.4
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 5.4e-29 133.3 130 56.2
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.6e-28 131.7 230 36.1
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-27 128.6 129 55.8
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.7e-27 128.3 230 36.5
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 3.7e-22 110.5 95 58.9
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 3.3e-10 70.9 145 33.8


User provided reference genes

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