Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3531 Capsella rubella HOM05D008344 ORTHO05D011034 8.4e-93 343.6 163 100.0
Carub.0002s1211 Capsella rubella HOM05D008344 ORTHO05D011034 6.9e-63 244.2 162 68.5
Carub.0003s3529 Capsella rubella HOM05D008344 ORTHO05D011034 1.7e-56 223.0 162 66.0
Carub.0003s3530 Capsella rubella HOM05D008344 ORTHO05D011034 4.8e-56 221.5 162 64.8
AL7G23410 Arabidopsis lyrata HOM05D008344 ORTHO05D011034 1.1e-49 200.3 163 58.3
AT4G29037 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 5.7e-49 198.0 163 59.5
Carub.0007s1157 Capsella rubella HOM05D008344 ORTHO05D011034 5.3e-47 191.4 162 57.4
CARHR236770 Cardamine hirsuta HOM05D008344 ORTHO05D011034 1.4e-42 176.8 133 57.1
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 1.3e-37 160.2 131 54.2
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 1.3e-37 160.2 131 54.2
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 2.2e-37 159.5 131 54.2
BolC1t01009H Brassica oleracea HOM05D008344 ORTHO05D011034 2.2e-37 159.5 131 54.2
Carub.0007s1156 Capsella rubella HOM05D008344 ORTHO05D011034 1.4e-31 140.2 150 46.0
THA.LOC104813236 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 8.0e-27 124.4 149 38.9
Thhalv10026925m.g Eutrema salsugineum HOM05D000070 ORTHO05D003190 2.6e-25 119.4 89 56.2
Carub.0007s3146 Capsella rubella HOM05D008344 ORTHO05D011034 5.7e-25 118.2 162 40.1
THA.LOC104811405 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 4.9e-24 115.2 131 40.5
THA.LOC104811406 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 6.3e-24 114.8 148 40.5
THA.LOC104815224 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 6.3e-24 114.8 148 40.5
AL6G13660 Arabidopsis lyrata HOM05D008344 ORTHO05D011034 5.4e-23 111.7 146 38.4
AT5G04047 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 5.9e-22 108.2 146 38.4
C02p19700 Brassica napus HOM05D008344 ORTHO05D011034 5.9e-22 108.2 144 38.9
BolC2t08105H Brassica oleracea HOM05D008344 ORTHO05D011034 5.9e-22 108.2 144 38.9
Carub.0007s0474 Capsella rubella HOM05D008344 ORTHO05D011034 5.9e-22 108.2 146 39.0
CARHR180630 Cardamine hirsuta HOM05D008344 ORTHO05D011034 3.9e-21 105.5 148 39.9
CARHR209190 Cardamine hirsuta HOM05D008344 ORTHO05D011034 3.9e-21 105.5 146 37.0
Thhalv10002237m.g Eutrema salsugineum HOM05D008344 ORTHO05D011034 2.3e-18 96.3 144 34.0
Carub.0006s2886 Capsella rubella HOM05D008344 ORTHO05D011034 3.1e-18 95.9 144 35.4
A03p01500 Brassica napus HOM05D008344 ORTHO05D011034 1.2e-17 94.0 132 34.8
C03p01830 Brassica napus HOM05D008344 ORTHO05D011034 2.0e-17 93.2 132 34.8
BolC3t12738H Brassica oleracea HOM05D008344 ORTHO05D011034 2.0e-17 93.2 132 34.8
AL6G44980 Arabidopsis lyrata HOM05D008344 ORTHO05D011034 4.4e-17 92.0 143 31.5
C02p19670 Brassica napus HOM05D008344 ORTHO05D011034 5.8e-17 91.7 139 35.3
BraA03t09528Z Brassica rapa HOM05D008344 ORTHO05D011034 9.8e-17 90.9 132 34.1
AT4G10895 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 1.9e-15 86.7 142 30.3
CARHR180620 Cardamine hirsuta HOM05D008344 ORTHO05D011034 7.8e-14 81.3 85 36.5
Carub.0006s0299 Capsella rubella HOM05D008344 ORTHO05D011034 1.7e-13 80.1 101 33.7
THA.LOC104802550 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 2.1e-11 73.2 151 29.1
BcaNung01337 Brassica carinata HOM05D008344 ORTHO05D011034 4.0e-10 68.9 55 56.4
THA.LOC104816440 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.0e-10 68.9 135 31.9
Thhalv10015869m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 2.2e-08 63.2 114 33.3
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 6.4e-08 61.6 117 33.3
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.4e-07 60.5 135 31.1
BcaC06g33884 Brassica carinata HOM05D008305 ORTHO05D010625 6.0e-06 55.1 102 34.3
C07p35910 Brassica napus HOM05D008305 ORTHO05D010625 6.0e-06 55.1 102 34.3
BolC7t44108H Brassica oleracea HOM05D008305 ORTHO05D010625 6.0e-06 55.1 102 34.3
A06p41710 Brassica napus HOM05D008305 ORTHO05D010625 7.8e-06 54.7 102 32.4
A10p31760 Brassica napus HOM05D003012 ORTHO05D002833 7.8e-06 54.7 122 36.1
BraA10t45221Z Brassica rapa HOM05D003012 ORTHO05D002833 7.8e-06 54.7 122 36.1
CARHR061070 Cardamine hirsuta HOM05D008344 ORTHO05D011034 7.8e-06 54.7 46 47.8


User provided reference genes

Program Settings