Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3529 Capsella rubella HOM05D008344 ORTHO05D011034 8.3e-96 353.6 167 100.0
Carub.0003s3530 Capsella rubella HOM05D008344 ORTHO05D011034 6.9e-74 280.8 168 78.6
Carub.0003s3531 Capsella rubella HOM05D008344 ORTHO05D011034 1.2e-57 226.9 162 66.0
Carub.0002s1211 Capsella rubella HOM05D008344 ORTHO05D011034 1.2e-54 216.9 166 63.9
AL7G23410 Arabidopsis lyrata HOM05D008344 ORTHO05D011034 2.6e-41 172.6 170 52.4
AT4G29037 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 5.9e-41 171.4 170 51.8
Carub.0007s1157 Capsella rubella HOM05D008344 ORTHO05D011034 2.2e-40 169.5 168 51.8
BolC1t01009H Brassica oleracea HOM05D008344 ORTHO05D011034 5.0e-32 141.7 131 51.9
CARHR236770 Cardamine hirsuta HOM05D008344 ORTHO05D011034 8.5e-32 141.0 133 48.9
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 1.5e-28 130.2 130 48.5
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 1.5e-28 130.2 130 48.5
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 2.6e-28 129.4 130 48.5
Carub.0007s1156 Capsella rubella HOM05D008344 ORTHO05D011034 1.3e-27 127.1 175 41.1
Carub.0007s3146 Capsella rubella HOM05D008344 ORTHO05D011034 1.3e-24 117.1 164 40.2
Thhalv10026925m.g Eutrema salsugineum HOM05D000070 ORTHO05D003190 8.8e-21 104.4 90 52.2
C02p19700 Brassica napus HOM05D008344 ORTHO05D011034 7.4e-20 101.3 129 38.8
BolC2t08105H Brassica oleracea HOM05D008344 ORTHO05D011034 7.4e-20 101.3 129 38.8
AT5G04047 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 9.7e-20 100.9 152 38.2
AL6G13660 Arabidopsis lyrata HOM05D008344 ORTHO05D011034 1.3e-19 100.5 146 38.4
THA.LOC104811405 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 2.8e-19 99.4 130 36.9
THA.LOC104813236 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 1.1e-18 97.4 129 38.8
CARHR180630 Cardamine hirsuta HOM05D008344 ORTHO05D011034 9.1e-18 94.4 148 41.2
A03p01500 Brassica napus HOM05D008344 ORTHO05D011034 1.1e-15 87.4 147 32.7
THA.LOC104811406 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 1.5e-15 87.0 129 33.3
THA.LOC104815224 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 1.5e-15 87.0 129 33.3
CARHR209190 Cardamine hirsuta HOM05D008344 ORTHO05D011034 2.5e-15 86.3 146 33.6
BraA03t09528Z Brassica rapa HOM05D008344 ORTHO05D011034 4.2e-15 85.5 147 32.0
AT4G10895 Arabidopsis thaliana HOM05D008344 ORTHO05D011034 2.1e-14 83.2 142 31.7
CARHR180620 Cardamine hirsuta HOM05D008344 ORTHO05D011034 4.1e-10 68.9 85 34.1
C07p35920 Brassica napus HOM05D008305 ORTHO05D010625 8.5e-08 61.2 101 40.6
BolC7t44109H Brassica oleracea HOM05D008305 ORTHO05D010625 8.5e-08 61.2 101 40.6
BcaC06g33883 Brassica carinata HOM05D008305 ORTHO05D010625 3.2e-07 59.3 101 39.6
THA.LOC104802550 Tarenaya hassleriana HOM05D008344 ORTHO05D011034 1.2e-06 57.4 137 30.7
BcaC06g33884 Brassica carinata HOM05D008305 ORTHO05D010625 4.7e-06 55.5 101 37.6
A06p41710 Brassica napus HOM05D008305 ORTHO05D010625 4.7e-06 55.5 101 36.6
C07p35910 Brassica napus HOM05D008305 ORTHO05D010625 4.7e-06 55.5 101 37.6
BolC7t44108H Brassica oleracea HOM05D008305 ORTHO05D010625 4.7e-06 55.5 101 37.6
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 6.1e-06 55.1 125 28.8
BcaC06g31040 Brassica carinata HOM05D008305 ORTHO05D010625 8.0e-06 54.7 101 37.6


User provided reference genes

Program Settings