Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 7.5e-98 360.5 184 100.0
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 4.6e-87 324.7 184 89.7
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 1.2e-84 316.6 193 88.1
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.5e-82 309.7 187 88.8
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 5.8e-82 307.8 185 86.5
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 8.3e-81 303.9 190 83.2
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 3.2e-80 302.0 188 83.0
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 3.2e-80 302.0 188 83.0
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 3.2e-80 302.0 188 83.0
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 3.5e-79 298.5 187 85.0
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 1.3e-78 296.6 190 83.2
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 7.3e-77 290.8 223 72.2
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 5.2e-75 284.6 191 78.5
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 1.5e-66 256.5 185 72.4
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 1.8e-59 233.0 182 67.0
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 3.1e-59 232.3 192 64.6
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 2.9e-57 225.7 188 63.3
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 4.2e-56 221.9 171 67.3
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 4.2e-56 221.9 189 62.4
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 9.3e-56 220.7 193 61.1
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 1.2e-55 220.3 185 62.7
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 3.5e-55 218.8 193 60.1
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 4.6e-55 218.4 169 67.5
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 4.6e-55 218.4 188 61.7
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.3e-54 216.9 169 67.5
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 1.3e-54 216.9 192 60.9
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 3.9e-54 215.3 156 69.9
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 5.1e-54 214.9 188 60.1
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 1.1e-53 213.8 173 65.3
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 4.3e-53 211.8 167 66.5
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 7.3e-53 211.1 192 58.9
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 9.6e-53 210.7 181 61.3
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 9.6e-53 210.7 190 61.6
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 9.6e-53 210.7 192 59.9
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 1.3e-52 210.3 192 60.4
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 1.3e-52 210.3 178 61.8
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 1.6e-52 209.9 172 63.4
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.6e-52 209.9 192 58.3
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 1.6e-52 209.9 191 58.1
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 2.1e-52 209.5 185 59.5
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 3.6e-52 208.8 187 59.9
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 3.6e-52 208.8 171 64.9
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 4.8e-52 208.4 192 57.8
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 8.1e-52 207.6 171 63.2
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.1e-51 207.2 189 61.4
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.1e-51 207.2 192 57.8
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 1.4e-51 206.8 169 63.3
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 2.4e-51 206.1 185 60.0
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 5.3e-51 204.9 172 62.8
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 5.3e-51 204.9 192 58.9
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 5.3e-51 204.9 186 58.1
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.2e-50 203.8 187 59.9
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 1.2e-50 203.8 186 59.7
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 1.5e-50 203.4 188 61.2
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 2.0e-50 203.0 177 58.8
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 3.4e-50 202.2 193 56.0
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 3.4e-50 202.2 181 60.2
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 3.4e-50 202.2 189 58.2
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 1.3e-49 200.3 181 59.7
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 1.7e-49 199.9 160 63.1
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 1.7e-49 199.9 187 57.8
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 2.2e-49 199.5 166 60.2
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 2.2e-49 199.5 182 59.9
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 2.9e-49 199.1 188 58.0
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.8e-49 198.7 171 60.8
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 4.9e-49 198.4 181 59.1
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 6.4e-49 198.0 194 54.6
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 6.4e-49 198.0 165 61.8
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 5.4e-48 194.9 173 58.4
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 5.4e-48 194.9 135 70.4
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 2.1e-47 193.0 168 58.3
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 4.6e-47 191.8 168 58.3
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 1.0e-46 190.7 175 55.4
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 1.3e-46 190.3 169 59.2
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 1.8e-46 189.9 193 52.3
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 3.0e-46 189.1 188 55.3
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 3.0e-46 189.1 140 63.6
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 3.9e-46 188.7 189 55.6
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 1.5e-45 186.8 182 52.7
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.5e-45 186.8 172 55.2
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 1.5e-45 186.8 165 60.0
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 1.9e-45 186.4 162 58.0
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 2.5e-45 186.0 143 60.8
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 5.6e-45 184.9 133 63.9
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 5.6e-45 184.9 133 63.9
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 5.6e-45 184.9 133 63.9
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 3.7e-44 182.2 163 56.4
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 1.8e-43 179.9 172 53.5
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 1.8e-43 179.9 183 50.3
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.4e-43 179.5 155 55.5
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 5.8e-42 174.9 183 50.3
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 2.2e-41 172.9 296 39.9
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 4.9e-41 171.8 193 52.8
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 4.2e-40 168.7 152 52.6
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 3.0e-38 162.5 127 68.5
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 1.3e-36 157.1 127 66.1
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 3.1e-35 152.5 117 67.5
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 4.1e-35 152.1 157 44.6
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.7e-33 146.7 189 49.7
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 2.2e-33 146.4 173 45.1
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 9.3e-32 141.0 152 45.4
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 7.9e-31 137.9 95 68.4
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 1.8e-30 136.7 118 50.0
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 4.8e-28 128.6 92 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 1.5e-26 123.6 176 39.8
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 5.9e-26 121.7 106 53.8
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 7.7e-26 121.3 122 52.5
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 8.2e-20 101.3 100 46.0
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 1.4e-16 90.5 124 40.3
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 1.4e-16 90.5 60 68.3
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 1.2e-15 87.4 144 38.9
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 4.7e-15 85.5 140 37.9
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 5.9e-10 68.6 64 64.1
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 2.3e-06 56.6 120 26.7
MCO16G209 Micromonas commoda HOM05D007042 ORTHO05D008441 5.2e-06 55.5 113 32.7


User provided reference genes

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