Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 1.1e-161 573.5 360 100.0
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 4.1e-140 501.9 362 81.5
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.0e-135 487.3 363 81.0
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 1.2e-118 430.6 368 80.4
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 2.5e-113 412.9 369 77.2
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 8.0e-112 407.9 380 77.4
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 3.2e-92 342.8 377 70.8
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 1.2e-88 330.9 375 70.9
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 1.9e-84 317.0 393 63.6
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 5.4e-84 315.5 365 64.4
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 9.2e-84 314.7 365 64.1
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 1.6e-83 313.9 365 64.1
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 3.5e-83 312.8 390 63.3
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 7.3e-73 278.5 416 55.0
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 6.9e-47 192.2 384 48.7
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 2.0e-46 190.7 425 50.4
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 1.0e-45 188.3 305 51.5
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 1.7e-45 187.6 390 50.5
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 5.5e-44 182.6 439 41.2
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 7.2e-44 182.2 401 40.9
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.6e-43 181.0 421 46.1
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.6e-43 181.0 380 45.8
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.5e-43 179.9 296 51.4
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 4.6e-43 179.5 402 44.5
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 7.9e-43 178.7 391 43.2
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.8e-42 177.6 293 50.2
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 8.7e-42 175.3 373 45.8
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 1.5e-41 174.5 298 48.7
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 4.3e-41 172.9 427 42.4
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 4.3e-41 172.9 427 42.4
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 5.7e-41 172.6 298 50.0
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 5.7e-41 172.6 295 50.5
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 5.7e-41 172.6 422 40.5
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 5.7e-41 172.6 422 40.5
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 9.7e-41 171.8 294 49.3
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 9.7e-41 171.8 379 43.5
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 1.6e-40 171.0 374 46.0
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.6e-40 171.0 384 43.5
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 2.8e-40 170.2 298 50.3
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 4.8e-40 169.5 347 41.8
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 4.8e-40 169.5 329 44.4
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 6.3e-40 169.1 342 45.0
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 6.3e-40 169.1 406 46.6
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 8.2e-40 168.7 386 42.5
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 8.2e-40 168.7 423 40.9
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 1.4e-39 167.9 299 48.5
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 1.8e-39 167.5 376 42.0
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 4.1e-39 166.4 250 49.2
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 4.1e-39 166.4 291 49.8
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 6.9e-39 165.6 291 48.8
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 6.9e-39 165.6 295 48.5
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 2.0e-38 164.1 418 40.9
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 3.4e-38 163.3 333 40.2
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 5.9e-38 162.5 321 46.1
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.7e-37 161.0 282 48.6
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 2.9e-37 160.2 296 48.0
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 3.8e-37 159.8 434 39.6
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 5.0e-37 159.5 300 47.7
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 5.0e-37 159.5 295 46.8
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.0e-37 159.5 368 41.8
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 6.5e-37 159.1 235 48.5
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 6.5e-37 159.1 393 40.5
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 1.1e-36 158.3 319 48.0
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 1.4e-36 157.9 303 46.2
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 4.2e-36 156.4 308 45.8
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 5.5e-36 156.0 385 41.6
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 5.5e-36 156.0 305 47.2
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.2e-35 154.8 293 46.1
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.6e-35 154.5 395 42.0
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.6e-35 154.5 438 41.6
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 1.6e-35 154.5 337 45.4
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 2.1e-35 154.1 386 42.5
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 2.1e-35 154.1 307 45.9
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 2.7e-35 153.7 400 40.2
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 6.1e-35 152.5 389 39.1
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 7.9e-35 152.1 291 46.7
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.4e-34 151.4 349 43.8
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 2.3e-34 150.6 362 42.3
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 3.0e-34 150.2 317 42.9
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 2.5e-33 147.1 359 40.1
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 1.7e-32 144.4 383 40.5
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 2.8e-32 143.7 360 40.6
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 3.7e-32 143.3 287 46.7
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 5.3e-31 139.4 214 46.7
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.2e-30 138.3 96 71.9
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 1.5e-30 137.9 125 63.2
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 1.5e-30 137.9 213 45.5
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 4.5e-30 136.3 111 64.9
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 4.5e-30 136.3 301 39.2
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 1.3e-29 134.8 96 68.8
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 3.8e-29 133.3 237 44.7
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 6.5e-29 132.5 112 63.4
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.1e-28 131.7 297 38.4
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-28 131.7 118 61.0
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.1e-28 131.7 333 36.0
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 2.1e-27 127.5 266 39.1
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 4.7e-27 126.3 336 34.8
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 5.1e-26 122.9 93 68.8
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 6.7e-26 122.5 95 67.4
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 2.8e-24 117.1 99 61.6
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 2.8e-24 117.1 411 34.3
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 4.1e-23 113.2 317 41.6
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 4.1e-23 113.2 77 75.3
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.5e-22 110.2 225 46.2
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 2.9e-21 107.1 334 40.1
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 4.2e-20 103.2 245 35.1
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 6.1e-19 99.4 285 35.1
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 2.3e-18 97.4 65 75.4
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 2.0e-17 94.4 85 54.1
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 9.7e-17 92.0 272 36.4
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 2.8e-16 90.5 74 66.2
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.6e-14 84.7 250 42.8
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 4.5e-14 83.2 231 44.2
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 1.3e-13 81.6 50 78.0
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 8.5e-13 79.0 51 74.5
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 5.5e-12 76.3 51 70.6
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 2.1e-11 74.3 51 70.6
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 8.8e-10 68.9 77 53.2
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 4.8e-08 63.2 232 33.2


User provided reference genes

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