Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 4.8e-70 267.7 133 100.0
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-61 238.8 133 88.0
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-61 238.4 133 88.0
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-57 225.3 133 83.5
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-52 209.9 135 77.0
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 9.4e-50 200.3 136 75.0
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 5.1e-48 194.5 135 72.6
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-48 194.1 135 71.1
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-48 194.1 135 71.9
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-48 194.1 135 71.9
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-47 192.2 135 72.6
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-47 191.8 135 69.6
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 4.4e-47 191.4 135 70.4
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 4.1e-45 184.9 135 68.1
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 4.5e-44 181.4 134 64.9
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 5.5e-42 174.5 135 67.4
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-41 172.2 135 63.7
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 5.2e-40 167.9 135 64.4
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.2e-40 167.9 136 66.9
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.2e-40 167.9 136 66.9
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-40 167.5 132 61.4
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 8.8e-40 167.2 136 66.9
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-39 166.8 137 65.7
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-39 166.0 135 62.2
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 4.4e-39 164.9 136 66.2
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 1.7e-38 162.9 132 62.1
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 2.2e-38 162.5 136 62.5
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 2.2e-38 162.5 135 60.0
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 6.3e-38 161.0 132 61.4
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 3.1e-37 158.7 135 59.3
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-37 158.7 138 60.1
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 5.0e-35 151.4 132 59.1
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 4.2e-34 148.3 132 58.3
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 5.5e-34 147.9 135 60.0
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.7e-33 145.6 137 57.7
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-32 143.7 135 58.5
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-32 143.7 135 58.5
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-32 143.7 135 58.5
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-32 143.7 135 58.5
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 2.3e-32 142.5 138 58.7
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.3e-32 142.5 132 55.3
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 6.8e-32 141.0 137 54.7
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.4e-31 138.7 109 62.4
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 9.7e-31 137.1 135 54.1
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 2.8e-30 135.6 136 52.2
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 2.8e-30 135.6 136 52.2
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 4.8e-30 134.8 136 55.1
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.8e-30 134.8 135 54.8
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.8e-30 134.8 137 51.1
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.1e-29 133.7 103 68.0
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.4e-29 133.3 136 55.9
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-29 132.9 136 50.0
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 7.0e-29 131.0 137 55.5
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.2e-28 130.2 136 50.0
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 1.2e-28 130.2 137 51.1
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 1.2e-28 130.2 137 51.1
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-28 130.2 95 64.2
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.6e-28 129.8 102 61.8
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.6e-28 129.8 130 55.4
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 7.7e-28 127.5 116 53.4
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-27 127.1 139 50.4
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 8.5e-27 124.0 138 48.6
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 1.9e-26 122.9 137 52.6
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 4.2e-26 121.7 124 53.2
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 4.2e-26 121.7 137 51.8
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 5.5e-26 121.3 141 51.8
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 9.4e-26 120.6 130 53.1
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 9.4e-26 120.6 132 52.3
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.4e-26 120.6 135 51.1
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.2e-25 120.2 125 51.2
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-25 117.9 135 52.6
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-24 116.3 137 48.9
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 1.8e-24 116.3 110 54.5
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.3e-24 115.9 112 56.2
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 6.8e-24 114.4 76 73.7
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.5e-23 113.2 91 62.6
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.6e-23 112.5 82 69.5
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 9.8e-23 110.5 128 47.7
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 2.8e-22 109.0 128 47.7
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 7.0e-21 104.4 106 50.9
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 1.7e-19 99.8 142 41.5
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 3.3e-18 95.5 143 40.6
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 8.0e-17 90.9 135 38.5
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 8.0e-17 90.9 135 38.5
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 2.3e-16 89.4 121 40.5
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 3.0e-16 89.0 147 38.1
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 4.0e-16 88.6 92 52.2
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 6.8e-16 87.8 125 44.8
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 4.4e-15 85.1 146 41.8
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 9.8e-15 84.0 147 34.7
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 9.8e-15 84.0 147 34.7
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.6e-11 71.2 64 53.1
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-08 63.9 117 32.5
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.4e-08 63.5 59 57.6
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.1e-08 62.4 57 57.9
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 1.2e-07 60.5 63 47.6
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.6e-07 59.3 80 40.0
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 1.7e-06 56.6 34 76.5


User provided reference genes

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